Varanus komodoensis (Komodo dragon): 123024408
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Entry
123024408 CDS
T07701
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123024408 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123024408 (BARD1)
04121 Ubiquitin system [BR:
vko04121
]
123024408 (BARD1)
03036 Chromosome and associated proteins [BR:
vko03036
]
123024408 (BARD1)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123024408 (BARD1)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123024408 (BARD1)
Ubiquitin system [BR:
vko04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
123024408 (BARD1)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123024408 (BARD1)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
123024408 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
BRCT
Ank_3
BRCT_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_10
zf-C3HC4_4
NIBRIN_BRCT_II
Prok-RING_4
zf-RING_UBOX
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
123024408
NCBI-ProteinID:
XP_044288015
Ensembl:
ENSVKKG00000018424
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MPPPGTLRVRSGNEPAGRMEQQQPPACHWKETRAALSRLAESLRCSRCRGILKKPVNVGG
CEHVFCLTCVGDSIGAACPVCHTPAMVQDVKVNRQLESIIKLYIKLQSLQNRDFTGTQDN
LSAPGEVDHEAGTKKQIKMWFSPRSRKMRFTLKRPEKPEQMVSDKDSQPHLPASAYDFIS
STPPQEPCRKVKKSQPKCKKQLTKKTLTDLNQQWGLLRGRQENVGGQNEGNPSEAKESVV
SFCSQTVMISSPNPKSTFEHQSTVGFVQHEDDFGMGGDASVISMEKTNNDNLFDAHDVAE
EPLTSEECLPSGREMAVLKRGRQQMESPASLAKRSRTKEQRTSRRASLLKESPRQSLRNS
LGKLSSLTPTASILTTLRNSKDFQHASSQIATEISTSSTNLAQKEAKEIALFTKKFPNNL
STKRNHKGETLLHVASIEGDLYAVEQLLKDGADPNVKDYAGWTPLHEACNHGHKEVVELL
LQHGALLNATGYQNDLPLHDAVKNGHTGIVELLLLRGASRDAVNIFGHKPMDYAETEKMK
SLLMLPVNNESSIIQCAEQLNLNHSREEPIVFLGSGLDPVQQQLLSKLAVVLKARISTEF
INTVTHVVIPEYPVRSTMKCMLAVLTGCWILTFEWVKACLQTGAREQEEKYEIDCGSRRG
RLNKEQLLPKLFDGCYFYFLGTFKEPNKEKLKELVKTGGGQILMRKPKPDNDVTQTVNTV
AYHAEITSDQSFCTQYIVYDASSSYHPEKVRQGKVWEVSSKWLIDCVMSFQLLPVEE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcccgggacgctccgggtccgctccgggaacgagcccgccggacgaatggag
cagcagcagccgcccgcatgccactggaaggagactcgggccgcgttgagccggctggcg
gagagcctacgctgctcccgatgcagaggaattctgaagaaacctgtgaatgtaggaggc
tgtgaacatgttttctgcctaacttgtgtaggtgattccattggtgcagcctgcccagtg
tgtcacacaccagccatggtacaagacgtaaaagtaaacaggcagctagagagtatcatc
aaactgtatatcaaattgcaaagcttgcagaacagggacttcacaggtactcaggacaat
ctgtctgctccaggagaagtagatcatgaggcaggaactaagaaacaaatcaaaatgtgg
ttcagtcctcgtagtaggaagatgagatttactttgaagaggccagagaagccagagcag
atggtgtcggacaaggatagccagccccatctcccagcttctgcatatgactttatttcc
tccactcctcctcaagagccatgcagaaaggtcaaaaaatctcagccaaaatgtaagaag
cagctgacgaagaagactttaacagatctcaaccaacaatggggtttgctgagaggaagg
caggagaacgttggtggccagaatgagggtaacccaagtgaagccaaggaatctgtggtg
tccttttgcagtcagacagtgatgatctctagtcctaatccaaaaagtacatttgagcac
cagtccacagttgggtttgtacagcatgaggatgactttggcatgggtggtgatgcatct
gtaatatccatggaaaagaccaacaatgataacttgtttgatgcacatgatgttgctgag
gaacctttgacatctgaggagtgtctcccctctggaagggaaatggctgtgctaaagcgt
ggcaggcaacaaatggaatctcctgcatctttagctaaacgctccaggacaaaagagcaa
agaacctccaggagagcatcactgctgaaagagtccccaaggcagtcactcagaaattct
cttggaaaactctcttcacttacaccaactgctagtatcttaacaacactgagaaactct
aaagactttcaacatgcaagtagtcaaatagctacagaaatatcaacttcgtctactaat
ctggctcaaaaagaagccaaagaaattgcacttttcaccaagaaattccccaataatcta
tcaaccaagagaaatcataagggggagactttactccatgtcgcttctattgagggagat
ctttatgctgttgagcaattactaaaagatggagcagatcccaatgttaaagactatgct
ggatggacaccactgcatgaagcttgtaatcatggacataaggaagtagtggagctattg
ctacaacatggggccctactgaatgcaactggctatcaaaatgatttgccacttcatgat
gctgttaagaatgggcatacaggcattgttgagctgctgcttttgcgtggagcttctcga
gatgcagttaatatatttggtcacaaacccatggattatgcagaaacagaaaagatgaag
tcactgctgatgttaccagtgaataatgaatcttctattatacaatgtgcagaacaacta
aacctaaatcactctagagaagagcctattgttttccttggaagtggtcttgatccagtt
cagcaacaattgttgagtaagttggctgtggttttgaaggccagaatatctacagaattt
attaacacagtgactcacgttgttatccctgagtatcctgtgcgaagtactatgaagtgc
atgctggcagttttgactggatgctggatcctgacatttgagtgggttaaggcctgcctg
cagacaggggctcgggagcaagaagagaagtatgaaatcgattgcggttcacgacgtggc
cggctgaataaagaacagctgttgcccaaattatttgatggctgctacttctattttctg
ggaacattcaaggagcccaacaaagagaaactcaaagaattggtgaaaacaggtggggga
cagattctcatgaggaagcctaagccagataatgacgtgacccagacagtcaatactgta
gcctatcatgctgagatcacttctgaccagagtttctgtacacagtatatagtctatgat
gcgtcttccagctaccaccccgagaaagttcgtcaaggaaaggtttgggaagtgtcgtcc
aaatggcttatagactgtgtgatgtcatttcaacttctgcctgttgaggaatga
DBGET
integrated database retrieval system
