Vulpes lagopus (Arctic fox): 121480562
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Entry
121480562 CDS
T07435
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121480562 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121480562 (BARD1)
04121 Ubiquitin system [BR:
vlg04121
]
121480562 (BARD1)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121480562 (BARD1)
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121480562 (BARD1)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121480562 (BARD1)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
121480562 (BARD1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121480562 (BARD1)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
121480562 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121480562
NCBI-ProteinID:
XP_041593120
LinkDB
All DBs
Position
22:complement(22043955..22117536)
Genome browser
AA seq
760 aa
AA seq
DB search
MPGGRRPRVRSGNQPRPAPAMEPSGRGAWAHSRAALDRLEELLRCSRCSNILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDDKLSDLKE
DTSRVNLFNDVENKKNSIKMWFSPRSKKVRYVVSKVSVQTHPQVISDENARQASMYEFVS
TSPPTNVSERAKKARTRSRKKQKKKTLTEINQKWNLEAEKEDDELDSKEEFKEKLVSFCS
QPSVNPSPQANGEIDLLASGSVTESQCFSSLAEVSLPLAEQIESPELESRNEELTPQKNL
CENPLPPKQPLPSGHSGRRGRRGQCSGRSSPISKRCRSSIPGTSSQHIVLSENKPLPGCS
SPPSSKLKIGDTLRRKNSNLSVESMTLSPGTPPSALNSPSYRRMMSSPSATKLSPNSLTA
VKRNHRGETLLHIASIKGDVPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL
QHQALVNTPGYQNDSPLHDAARNGHLEIVKLLLASGASRDAVFIIYHVTVAKDSSEKAIP
PRPNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDNTVTHVIVPGDTVQST
LKCMLGILNGCWILKFEWVKACLQRKACEQEEKYEIPEGPHRSRLNKEQLLPKLFDGCYF
YFGGTFKHHPKDNLIKLVTAAGGQVLSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYI
IYEDLSNHHSKRVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgccggggggccggcggccgagggtccgctccgggaaccagcctcgtcccgcgcccgcc
atggagccgtccgggcgcggggcctgggcccacagccgcgccgcgctcgaccggctggag
gagctgctgcgctgctcgcgttgctctaatattctgagggagcctgtgtgtttaggaggg
tgtgagcacatcttctgtagtaattgtgtaagtgactgtattggaactggctgcccagtg
tgttacaccccagcgtggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatgatgataagctttcagatttgaaagaa
gacacatctagggtaaatttatttaatgatgtagaaaataagaagaattcaataaaaatg
tggttcagtcctcgaagtaagaaggtcagatatgttgtgagtaaagtttcagtgcaaacc
catcctcaagtcataagtgatgagaatgctcggcaggcttcaatgtacgaatttgtttct
acaagtcctccaacaaatgtttcggagagggctaaaaaggctcgtacaagatctagaaaa
aagcaaaaaaagaaaactttaaccgaaatcaaccaaaaatggaatttagaagcagaaaaa
gaagatgatgaacttgactccaaagaggaatttaaggagaagctggtgtctttctgtagc
caaccgtctgttaaccctagtcctcaggcaaatggtgaaatagacttacttgcaagtggc
tctgtcacagaatcacagtgttttagcagcttagctgaagtctctttaccattagctgag
caaatagagtctccagaattggagagcaggaatgaagaattgactccccagaagaatctc
tgtgagaatcctcttccacctaagcagcccttgccatcaggtcacagtggacggcgtggg
cggcgtgggcagtgcagcggccggtccagtcccatttctaagagatgcagaagcagcatt
cctggcaccagtagccagcacatagtgctttcagaaaacaagccattgcctggctgctct
tcaccaccttcaagcaaacttaaaattggtgacacattaaggaggaaaaacagtaatctg
tcagttgagtccatgaccctttcaccaggtacaccgccttctgcgctgaatagcccaagt
tacagacggatgatgtctagcccctcagcaacaaagctgtcacccaatagccttacggct
gtgaagagaaatcatagaggagagactctgctccatattgcttcaattaagggtgacgta
ccttctgttgagtacctcttacaaaatggaagcgacccaaatgttaaagaccatgctgga
tggacaccattgcacgaagcctgcaatcacgggcacctgaaggtagtggagttgttgctg
cagcaccaggcgttggtgaacactcctggctatcagaacgactccccgcttcacgatgct
gccaggaatgggcacttggagatagtcaagctcttactcgcctctggagcctccagggat
gccgtctttattatttatcatgtcacagttgctaaagattcatctgaaaaggcaattcca
cctaggccaaacactggtcagcgtagggatggacctcttgtgcttataggcagtgggctt
tcttcagaacaacagaaaatgctcagtgagcttgcagcaattcttaaggctaaaaaatgt
gctgaatttgacaatacagtaactcatgtcattgttcctggggatacagttcaaagtacc
ctgaaatgtatgcttgggattctcaatggatgttggatcttaaaatttgaatgggtgaaa
gcatgtctacagagaaaagcatgtgaacaagaggaaaaatatgagatacctgagggaccc
catcgaagcaggctcaacaaggaacagctgctgccaaagctgtttgacggatgctacttc
tattttgggggaaccttcaaacaccatcccaaggacaaccttattaagcttgtcactgct
gctgggggccaggtcctcagtcgaaagcccaagccagacagtgacgtgactcagaccatc
aatacggttgcgtaccacgcgagaccagattccgatcagcgcttctgcacacagtatatc
atctacgaagatttgtctaatcatcactcaaagagggttcggcagggcaaagtctggatg
gctccttccagctggtttatagattgtgtgatgtcctttgagttgctccctcttgacagc
tga
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