Vulpes lagopus (Arctic fox): 121482955 Help Entry 121482955         CDS       T07435                                  Symbol HDAC6 Name (RefSeq) histone deacetylase 6 isoform X1   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism vlg  Vulpes lagopus (Arctic fox) Pathway vlg04613   Neutrophil extracellular trap formation vlg05014   Amyotrophic lateral sclerosis vlg05034   Alcoholism vlg05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:vlg00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     121482955 (HDAC6)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     121482955 (HDAC6)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     121482955 (HDAC6)   09165 Substance dependence    05034 Alcoholism     121482955 (HDAC6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:vlg01009]     121482955 (HDAC6)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vlg03019]     121482955 (HDAC6)    04131 Membrane trafficking [BR:vlg04131]     121482955 (HDAC6)    03036 Chromosome and associated proteins [BR:vlg03036]     121482955 (HDAC6) Enzymes [BR:vlg01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      121482955 (HDAC6) Protein phosphatases and associated proteins [BR:vlg01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      121482955 (HDAC6) Messenger RNA biogenesis [BR:vlg03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      121482955 (HDAC6) Membrane trafficking [BR:vlg04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     121482955 (HDAC6) Chromosome and associated proteins [BR:vlg03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      121482955 (HDAC6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  121482955 NCBI-ProteinID:  XP_041597039 LinkDB All DBs Position X:42087966..42108359 Genome browser AA seq 1190 aa AA seqDB search MEKRASSTRRPAGRQEFGGGSPGRSLKKGLRSSRVRGEVSPTMTSTGQDSTTTRQRRSRH NPHSPPHDSSVTSKRGVKKGALSHSSPSLAEVKKKGRMKKLSQAAEQDLIVGLQGLDLNL EAKTLCGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQDGLLDRCVYFQARFAEK EELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPVWIRTNSYTCACLASGSVLR LVDAVLRNEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWD VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVG MRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGL AGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPILESPSAPCPSAQASLFCALEALEP FWEVLVRSAEALEEDILEEEKAEKEEERPWQPSVLPVLTWPMLQARTGLVYDQRMMGHYN LWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHSAEYVGRLRATEKM KTRELHREGSNFDSIYICPSTFACAQLATGSVCRLVEAVLAREVLNGAAVVRPPGHHAER DAACGFCFFNSVAVAARHAQSISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRY DHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYEFNPEL VLVSAGFDAARGDPLGGCHVSPEGYAHLTHLLMGLANGRVVLILEGGYNLTSISESMAAC TRSLLGDPPPLLTLSRPPLSGALASITETIQIHRRYWRSLRVMKVEDKEGPSTSELITKK VTQPANPGSSERMTTPEGNILDIDTEKGPSASSVEESTPGQAKSETAVVELNQDQSLEAT TGETTLDQTIPEAATEGTTPGQTTSEEAVGGAEVIQTSCTDNQTPPTSPVQGATPQISPS KLIENLRTLELNNKAEKAPESQIPEEEGLLGEAAGGQDVDDSVLNESCGDHADTDQVVLY AVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGVLQENWVCLSCYQVYCGRYISAHMLHHH EDSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKNVAHQNKFGEDMPHSH NT seq 3573 nt NT seq  +upstreamnt  +downstreamnt atggaaaagagggcctcaagcacccgccgtcccgcaggtcgccaggaatttggcggcggg agccctgggcggagtttgaaaaaagggctgcgctcaagccgcgtcaggggtgaagtctcc ccgaccatgacctccaccggccaggattccaccacaaccaggcagcgaaggagtaggcat aacccccattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggt gccttaagccactccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaag ctcagccaagcagcagagcaagacctaatcgtgggcctgcaagggctggatctgaacctt gaggccaagacactttgtggcactggattggtgtttgatgagcaactaaatgaattccac tgcctctgggatgacagctttcctgagggccctgagcggctccatgccatcaaggaacaa ctgatccaggatggcctcctggaccgctgcgtgtacttccaggctcggtttgctgaaaag gaggagctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtac atgaatgagggagagctccgcatcctagctgacacctatgactcagtttatctgcatccg gtatggataagaactaactcctatacttgtgcctgcctggcctcaggctctgtccttagg ctggtggatgcagtcctgaggaatgagatccggaatggcatggccattgtcaggcctcct ggacaccatgcccagcacagccttatggatgggtattgcatgttcaaccatgtggccgtg gctgcccgctacgctcaacagaagcataacattgagagggtccttatcgtggattgggac gtacaccatggtcaaggaacacagtttacctttgaccaggaccccagcgtcctctatttc tccatccaccgctatgagcagggtcggttctggccccacctgaaggcctctaactggtcc accataggttttggccaaggccagggatataccatcaatgtgccttggaaccaggtgggg atgcgagatgctgactacattgctgctttcctgcgcctccttctgccagtcgcccttgag ttccagccccagctggtcctggtggccgctggatttgatgccctccaaggggaccccaag ggtgagatggccgccactccggcagggttcgctcagctaacccacctgctcatgggtctg gcaggaggcaagctgatcctgtctctggagggcggctacaacctccgcgccctggctgag ggtgtcagcgcctcactccacacccttctgggagacccctgccccatcctggagtctccc agtgccccctgcccaagtgcccaggcgtcactcttctgcgccctggaagccctggagccc ttctgggaggtccttgtgagatcagctgaggccctggaggaggacatcctggaggaggaa aaggcggagaaggaagaggagagaccgtggcagccctcagtgctcccagttctgacatgg cccatgctgcaggctcgcacagggctggtctatgaccagcggatgatgggtcactacaac ttgtgggacaaccatcacccagagatgcctcagcgagtctttcggatcatgcgccgtttg gaagagctgggccttgcagggcgctgccttaccttgcccacacgtcctgccacggacgct gagctgcttacctgccacagtgccgagtatgtgggccgtctgcgggcaaccgagaagatg aaaacccgggagctgcaccgcgagggctccaactttgactccatctacatctgccccagc acctttgcctgtgcgcagctggccactggctctgtgtgccgcctggtggaggctgtacta gccagagaggttttgaatggtgctgctgtggtgcgtcccccaggacaccatgcagagcgg gatgccgcttgtggtttctgctttttcaactctgtggctgtggctgctcgccatgcccag tccatcagtgggcatgcgctgcggatcctgatagtagactgggatgtccatcatggtaat ggaactcagcacatatttgaggaagaccccagcgtgctctacatttccctgcatcggtat gatcacggcaccttctttcccatgggggatgagggtgccagcagccaggtaggccaggcc gcaggcactggcttcactgtcaacgtggcctggaatgggccccgcgtgggtgacgccgac tacctggctgcctggcatcgtctggtgcttcctattgcctacgagtttaacccggaactg gtgctggtctcagctggctttgacgctgcacggggggacccgctggggggctgccacgtg tcgccagagggctatgcccacctcacccacctgctgatgggcctcgccaatggccgtgtt gtcctaatcctggagggtggctataacctgacatccatctcagagtccatggctgcctgc acccgttccctccttggggacccaccaccactgctaaccctgtcgcggcccccactatcg ggggccctggcctccatcaccgagaccatccaaatccatcgcagatactggcgcagcttg cgagtcatgaaggtcgaagacaaggagggaccctctacttctgagttgatcaccaagaaa gtgacccaaccagccaaccctgggtcatctgagaggatgaccacaccagaagggaacatt ctggacatagacacagagaagggtccctcagcatcatccgtggaagagtccactcccggg caagctaagtcagagactgctgtggtggagctcaatcaggaccagtccttggaggctacc acaggggaaaccactctggaccagaccatcccagaggcagccacagaaggaaccacacca ggccagaccacctcagaggaagctgtggggggagctgaagtgatccaaacctcatgtact gataaccagactcccccaacctcacctgtgcaaggagccacaccccagatatcccccagt aaactgattgagaatctcaggaccttggaactaaacaacaaggctgagaaggcaccagaa tctcagatcccagaagaggaggggctactaggagaggcagctggaggtcaggacgtggat gattctgtgctgaatgagagctgtggggaccatgctgacactgaccaggtcgtgctttat gccgtgacaccgctgccctggtgtccccatttggtggcagtgtgccccatccctgagtca ggcctcgacgtgacccaaccttgtcaggactgtggagtgctccaggagaactgggtgtgt ctctcttgctatcaggtatactgcggtcgttacatcagtgctcatatgctccaccaccac gaagactcaggacacccgctggtcctcagctacgtcgacctatccacctggtgttacaac tgtgaggcctatgtccaccaccaggctctcctagatgtgaagaacgttgctcaccagaac aagtttggggaggacatgccccactcacactaa

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