Vigna unguiculata (cowpea): 114187250
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Entry
114187250 CDS
T06017
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114187250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114187250
04121 Ubiquitin system [BR:
vun04121
]
114187250
03036 Chromosome and associated proteins [BR:
vun03036
]
114187250
03400 DNA repair and recombination proteins [BR:
vun03400
]
114187250
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114187250
Ubiquitin system [BR:
vun04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
114187250
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114187250
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114187250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_3
zf-C3HC4
zf-HC5HC2H_2
zf-RING_6
zf-RING_UBOX
RTT107_BRCT_5
zf-RING_5
zf-C3HC4_2
PTCB-BRCT
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
114187250
NCBI-ProteinID:
XP_027931246
LinkDB
All DBs
Position
1:32717170..32722667
Genome browser
AA seq
673 aa
AA seq
DB search
MEDSTKPSAGKTKLLNPWMLHFQKLALELKCALCLSLFKRPVLLPCNHLFCDSCLADCAA
AGAGSECAVCNAKYAQTDVRHVPFVENVVAIYKSLEATFCPSLFHKHSSGDERVLEPCQA
VLNSTSSSIQARKLPMNLPNLNKVGVVKNHKSKIAGHDKAEELEFSHGRGKPNVMQSSHV
EMDVNQVTQSAPDSPLFCDTKGSDNDCSDQDSEHQLPPDRLGNSSLKRASTGNGNLNEKM
GQLRSESSASETEGLERDPKRHKILGLKSGKVPGAQLPADTSNDFSPTGSTCSFCQSSKT
SEATGPMLHYANGNLVTGDAATKPNVIPVHRVCIDWAPQVYFVGEVVKNLKAELARGAKL
KCSKCNLKGAALGCYVKSCRRTYHVPCALDISTCRWDHEDFLLLCPLHSNVKFPCEKSRS
KKQAVRKHPNLPQLPPHHSNTLEVSQDDGKNMVFCGSALSNEEKVLLLNYASKVGATVTK
FWTSNVTHVIASTDANGACSRTLKVLMAILNGRWVLKLDWIKACMEEKNPVEEEPYEISV
DNQGCQGGPRAGRLKALANEPKLFSDLKFYFSGDYVSTYKEDLEELIEVGGGAVLRSKEE
LVAQRQECKVNSPKLLVVYNLDPPQGCKLGEEVSILWQRLNDAEDLAANTLQVIGHTWIL
ESIAACNLQPFVN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccacaaaacctagcgccggaaaaaccaaacttctcaatccatggatgctt
cacttccagaaactcgctcttgaactcaagtgcgctctctgtttgagtttattcaagaga
ccggtgttacttccatgcaaccaccttttctgcgattcatgcttagctgattgcgcagca
gctggcgctggttctgaatgtgctgtttgtaatgcaaagtatgctcaaacagatgtaagg
catgtgccttttgtggaaaatgtggtagcaatatacaaaagcttggaggccaccttttgt
ccaagtttgtttcataaacattcttctggtgacgagagggttttggagccatgccaggca
gttcttaattcaacttctagcagcatacaagctcgcaagcttcctatgaatttgcctaat
ttgaacaaggttggggttgtcaagaatcacaaatccaagattgcagggcatgacaaagct
gaagaacttgagttctctcatgggagagggaagcctaatgtgatgcaatcttcccatgtg
gaaatggatgtgaatcaagtgacacaatcagccccagatagccctcttttttgtgatacc
aaaggttcagataatgactgcagtgatcaagacagtgagcatcaactacctcctgataga
ctgggaaactcgtccttaaagagagctagtacaggaaatggaaatttgaatgagaaaatg
ggacaattaaggtcagaaagttcagcctctgaaactgagggtcttgaaagggatcccaag
agacataaaattcttggccttaaatctggaaaggtccctggtgcacaattgccagcagat
acttcaaatgacttttctccaactggaagtacttgttcgttttgccaatcttccaaaacc
tctgaggctactggaccaatgctgcattatgctaatggaaacttagttactggagatgca
gcaacgaagccaaatgttatacctgtgcatagagtttgcattgactgggcaccacaagtg
tactttgttggtgaagtggttaagaatctcaaggcagaattggcaaggggagcaaaactt
aaatgcagtaaatgtaatctgaagggagctgctcttggctgctatgtcaaatcatgcaga
agaacttatcatgttccttgtgcacttgacatctcaacttgtcgttgggatcatgaggat
tttcttttgctctgccctctccattcaaacgtcaaatttccatgtgagaaatccaggtct
aagaagcaggcagttcggaagcatcccaatttgcctcaattgccaccgcaccactcaaat
actcttgaagtttcacaggatgatggtaaaaatatggttttctgtggatctgctttatca
aacgaggaaaaggtacttttgctcaattatgcaagcaaggttggtgcaactgtgacgaag
ttctggacctcaaatgttacacatgtaatagcatcaactgatgctaatggagcatgctcc
aggacattgaaagttctcatggccattctaaatggacgatgggtactaaaattggattgg
ataaaagcatgcatggaagagaagaatcctgtagaagaagaaccatatgaaattagtgtc
gacaaccaagggtgtcaaggtggcccaagagctggcagacttaaggccttggccaatgag
ccaaagctattcagcgacttaaagttttatttttctggggattatgtgtcaacttataag
gaagatcttgaagaattaattgaagtgggtggaggtgctgttttgagaagcaaggaagaa
ttggtagcacaaagacaagaatgcaaagtgaattctccaaagttgcttgttgtttacaac
cttgatcccccacaaggatgcaagctgggggaagaagtatcaattctctggcaaagactg
aacgacgcagaggatttagctgccaatactttacaagtgattggtcacacttggattctt
gaatcaattgctgcatgtaacttgcagccttttgttaactaa
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