Xenopus tropicalis (tropical clawed frog): 493398
Help
Entry
493398 CDS
T01011
Symbol
extl3
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
xtr01100
Metabolic pathways
Module
xtr_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
493398 (extl3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
493398 (extl3)
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
493398 (extl3)
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
493398 (extl3)
Glycosyltransferases [BR:
xtr01003
]
Glycan extension
O-Glycan
493398 (extl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
ADIP
MscS_porin
DUF1664
Seryl_tRNA_N
Noelin-1
EXOC6_Sec15_N
TBK1_CCD1
CCDC22_CC
TPR_MLP1_2
THOC7
BRE1
Motif
Other DBs
NCBI-GeneID:
493398
NCBI-ProteinID:
NP_001008036
Xenbase:
XB-GENE-855819
UniProt:
Q66JH0
LinkDB
All DBs
Position
5:complement(151932985..151990935)
Genome browser
AA seq
919 aa
AA seq
DB search
MSGYTMLRNGGLGNGGQPWMLRWSSRIRLSWLSFTLFIILVFFPLIAHYYLTTIDDANDP
DRRIFGPRTGNELCEVKHVQDLCRIRESVSEELLQLEAKRQELNSEIAKLNLKIEACKKS
IENAKQDLLQLKNVISQTEHSYKELMAQNQPKLSLPIRLLPEKDDINIPLPKSKRNCGLH
NCFDYSRCPLTSGFPVFVYNSDQYPFGNFIDPLIKQALEASVRNNVYVTENANNACIYVV
LMGEMQEPVMPKPTELEEQLHSLPYWRTDGHNHLIINLSRKSETQNYLYNVSTGRAMIAQ
STFYDLQYRPGFDIVVSPLVHAMSEPNFLEIPPQVPVKRKYLFSFQGEKIESLRSSLQEA
RSFEEEMEGNAPADYDDRIITTLKAVQDSKLDFVMVEFTCKNQAKPSLPTEWALCGERDD
RLELLKQSTFALIITPGDSQLVISAGSAMRLFEALEVGAIPVILGEQVQLPYHDTIRWNE
AVLILPKPRITEVHFLLRSISDNDLLSLRRQGRFLWETYFSTSDTVFNTILATVRTRIQI
PAAPIKEEPAVEIPHRSGKAAGTDPNMADNGDLDLGPVETEPPYASPKYLRNFTLTAADI
YRNWNTAPGPFHLFPHTPFDPLLPSEAKFLGSGTGFRPIGGGAGGSGKEFQAALGGNVPR
EQFTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKLPSEDLLWPDIGVPIVIVRT
EKNSLNNRFLPWDQIETEAVLSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDI
PHRSWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLV
SHITRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVD
SVLFKTRLPHDKTKCFKFI
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggtataccatgctgcgaaatgggggattggggaacggaggtcagccgtggatg
ctacgttggtccagtcgaatcaggctctcttggctcagcttcacgttgttcatcatcctc
gttttcttcccccttatcgcccactattacctcaccaccatcgacgatgcgaacgatccc
gacaggaggatctttggcccgcgaacggggaacgaactttgtgaagtcaagcacgtacag
gatttgtgtcgaatcagagaatcggtaagtgaagagctgctccagctcgaagccaagcgt
caggaacttaatagcgaaattgctaaattaaaccttaaaatcgaagcgtgcaaaaaaagc
atcgaaaatgctaagcaggaccttctgcagctcaaaaatgtcatcagtcaaacggaacat
tcatataaagaactgatggcccagaatcagccaaagctttcattgccaatccggctgttg
ccagagaaggatgatattaacatacctttgccaaagtccaaaaggaactgcgggctacac
aattgtttcgactactcacggtgcccgcttacttctgggttccccgtattcgtctacaac
agtgatcaatacccttttggtaactttatagaccctttaatcaaacaagccttggaggcg
agcgtcagaaataacgtttatgtgactgaaaatgcaaataatgcgtgtatatatgtagtc
ttaatgggggaaatgcaggagccagtgatgccaaaacctactgaactggaggaacagtta
cactctttgccatattggaggactgatggccacaaccatcttattataaacttgtccagg
aaatctgaaacccagaactatctttataatgtcagcacggggcgcgccatgatcgctcag
tcgacgttttatgacttacagtacaggcccggttttgatatcgtggtgtcgccgttagtc
cacgccatgtccgaacccaacttcctggagattccacctcaggtgccggtgaaacggaag
tacctattcagcttccagggagaaaagattgagtcgctgcgttctagtttgcaagaggcc
cggtcgtttgaggaagaaatggaaggcaacgcgccggcggactacgacgaccgcatcatt
actacccttaaggctgtccaggacagtaagttggattttgtcatggtcgagttcacttgc
aaaaatcaggcgaagccaagtctgcccactgagtgggctttgtgtggggaaagggacgac
aggttggagctactgaagcaatctacatttgcactgataattacgccgggagattcgcag
ctggttatatctgctggcagtgccatgaggcttttcgaagctctggaggtaggcgctatt
cccgtcatcctcggagaacaggttcaactgccgtatcacgatacaatccggtggaacgag
gcggtgttaatactaccaaagccacgcatcaccgaagtccactttctcttgagaagtata
tcggacaatgacctcctctcgctgaggaggcaaggccgtttcctgtgggagacctacttt
tctacttctgatacagtatttaatactattttagcaaccgttaggactagaatacaaatt
cccgccgctcccattaaagaggaaccggcggtagagattcctcatcggtccggcaaagcc
gccggcaccgatcccaacatggcggacaacggagacttagatttggggccggtggaaaca
gagcctccttatgcgtctcctaagtatctgagaaacttcaccctcaccgcagcggatatc
taccgcaactggaatacagcccccggcccttttcacctatttccgcacacaccctttgat
cctctcttaccctctgaagcgaaatttcttggttctggtactggtttccggccgatcggc
ggcggagccggcggctcgggaaaagagtttcaagctgccctcgggggaaatgtgccccgg
gaacagttcacggtggtcatgttgacgtacgagcgcgaggaagtgttgatgaactctttg
gaaaggctgaatggactgccgtacttgaataaagtggtggtggtatggaattctccaaag
ctgccgtctgaagacctgctgtggccggatattggggtaccgatcgtgattgtgcgcacg
gagaagaacagcctgaacaatcgcttcctcccctgggatcagatagagacggaggccgtt
ctctccatcgatgatgatgcccacctgcgccacgatgaaatcatgttcggcttccgggtg
tggagagaggcgagggataggatcgtcggctttccgggtcgctaccacgcctgggacatc
ccccaccggtcctggttgtacaactccaactactcctgtgagctctctatggtactcacc
ggcgccgccttctttcacaagtactacgcctatctgtattcttatgtcatgccccaagcc
atccgggatatggtggacgagtacatcaactgtgaggatatcgccatgaacttcctggtc
tctcacatcactaggaaacctcctatcaaggtgacatctcgctggacgttccgctgcccc
ggttgcccccaggccctcagccacgacgattcccatttccacgagcgccataaatgcatc
aacttcttcgtcaaggtgtacggctacatgcccctcctctacacccagttccgcgtggac
tccgttctcttcaaaaccagactcccccacgacaagaccaagtgcttcaagttcatctaa
DBGET
integrated database retrieval system
