Zonotrichia albicollis (white-throated sparrow): 102065343
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Entry
102065343 CDS
T07911
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102065343 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102065343 (BARD1)
04121 Ubiquitin system [BR:
zab04121
]
102065343 (BARD1)
03036 Chromosome and associated proteins [BR:
zab03036
]
102065343 (BARD1)
03400 DNA repair and recombination proteins [BR:
zab03400
]
102065343 (BARD1)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102065343 (BARD1)
Ubiquitin system [BR:
zab04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
102065343 (BARD1)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102065343 (BARD1)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102065343 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-RING_10
zf-C3HC4_4
NIBRIN_BRCT_II
zf-RING_UBOX
Prok-RING_4
zf-RING_2
RTT107_BRCT_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
102065343
NCBI-ProteinID:
XP_005486936
Ensembl:
ENSZALG00000012382
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MREALRGRSGNQPAPVSPLRPAAPSMAPPGHTWSHTRAALGRLEKALSCSRCAGVLREPV
SLGGQCEHVFCLSCVGDSVGSGCPVCHVPAWVQDAQINRQLDNMIQLCSQLRQLLSTHTA
GSAEETSTPPESELEKKSKKEQIKMWFSPRSRKIRCVVNRSQAGTKSTNLAQDTSSVYDF
FPSPPHEKPSKPTKKATQRQMKKMKKKHLADINKVWSLEKPEQKKAEKAPKEKCVTICSQ
PVVLCTQEPESPEHRPQQEPVKEADSSSNAEDVEVLPQVESPKKDNSEVVCSAAESKETH
GAAETLLSGANEVTPLKRGREQCRLQGTPQSKRARRSERGIPGQAGRQAAASEQSLQGSP
VSPAHISSSAAKLTGTAMKTRSAALQVTNSPSLSESPSTPSTSKSCSQGATPLSPSVVKS
PAVNSIARRNYKGETLLHVASIKGDLAAVEELLKNGADPNVKDNAGWTPLHEACNHGHSE
VVQLLLRHRALVNTTGYQNDSPLHDAARNGHLAVVELLLLHGASRHAVNIFGLRPVDYAE
SKKMKSLLMLPVENESFSLTQPSEVLSSSQPRNGPLGILGSNLSVEQQKLLNKLAAVLKA
QRCTEFNSRVTHLVIPDVPMPTTVKCMMAVLAGCWVLKFEWVQACLQSSAREQEEEYEVQ
GGPRRGRLNREQLLPKLFDGCYFYFMGPFKQQQKSELLELVKAAGGQVLVRQPKPDSDVT
QTINTVSYHAEPTSDQRLCTHYVIYDAASKFQPQKIRQGKVWMAPSSWLIDCVMAFQLLP
VKGISNSSKDVKWARSGAAGKL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcggacgctcgggcaaccagccggccccagtcagccctctccgt
cccgctgccccctccatggcgccgcccgggcacacctggtcccacacccgcgccgcgctg
gggcggctggagaaggcactgagctgctcccgctgcgccggtgtcctgcgggagcccgtg
tccctgggggggcagtgcgagcacgtcttctgcctgtcctgcgtgggtgacagcgttggc
agcgggtgccccgtgtgccacgtgccagcctgggtgcaggacgcgcagatcaaccggcag
ctggataacatgatccagctgtgcagccagctgcggcagctcctgagcacccacaccgca
ggttcagcagaggagacatccacaccccctgagtcagagctggagaagaagagcaagaag
gagcagataaaaatgtggttcagccccaggagcaggaagattcgatgtgttgtgaacagg
agtcaggctggcactaaaagcactaaccttgctcaagacacatcttcagtttatgatttc
tttccttcccctcctcatgaaaagccctctaagccaacaaaaaaagcaactcagaggcag
atgaagaagatgaagaagaaacacctagcagacattaacaaagtgtggagcttagagaaa
cctgagcagaaaaaagctgagaaggctcccaaggagaagtgtgtgaccatctgcagtcag
ccagtagtgctgtgcactcaggaaccagagtctcctgagcacagaccccagcaggagcct
gtcaaggaagctgactccagcagcaatgcagaagatgtggaagttctaccacaggtggaa
tccccaaagaaggataacagtgaggttgtgtgctctgcagcagagagcaaggaaacacat
ggtgctgcagagacactgctgtcaggagcaaatgaagtgacacccttgaaacgtggcagg
gagcagtgcaggctgcagggaactcctcagtccaagagagcaaggagaagtgagaggggc
attcctggccaggcaggcaggcaggctgctgcctcagagcagtctctgcagggctccccc
gtctccccagcccacatttcctcctctgcagccaaactcactggcactgcaatgaagaca
agatctgcagcccttcaagtcacaaacagtccttcactttcagagtctccctctacccca
tccacttccaagagttgcagtcaaggagcaacaccactcagtccttctgtggtgaaatcc
cctgctgtcaactccattgccagaaggaattacaagggagagactttgctccatgttgct
tccatcaagggtgacttagcagctgtggaggagctgctgaaaaacggggcagatcccaat
gtcaaagataatgctggctggacaccactgcacgaggcgtgcaaccacgggcacagcgag
gtggtgcagctgctgctgcggcaccgggcgctggtgaacaccacgggctaccagaacgac
tcgccgctgcacgacgccgccaggaacggccacctggccgtggtggagctgctgctgctg
cacggcgcctcccgccacgccgttaatatatttggtctgcggcctgtggactatgcagaa
agcaaaaagatgaaatctctgctcatgttaccagtggagaatgaatcattttcactcacc
cagccctctgaggtgctgagctccagccagccaagaaatggaccccttggtatactgggg
agcaatcttagtgtggagcagcagaaattgctgaacaaattagcagcagtcctgaaggcc
cagaggtgcactgaatttaacagcagagtaactcacctcgttatccctgatgttccaatg
ccaaccactgtcaagtgcatgatggctgttctggctggatgttgggtcctcaagtttgaa
tgggtgcaagcctgcctgcagagctcagctcgagaacaagaggaggagtacgaagtgcaa
ggtggcccccggcgcgggcggctcaacagggagcagctgctgcctaagttatttgatgga
tgctacttctattttatgggacctttcaaacagcagcagaagagtgagctgctggagctg
gtgaaagcagcaggtggccaggtgctggtcaggcagcccaaaccagacagtgacgtgacc
cagaccatcaacaccgtgtcctaccacgccgagcccacctctgaccagaggctctgcaca
cactacgtcatctatgacgcggcttccaagttccagccgcagaaaatccgccagggcaag
gtgtggatggccccctccagctggctcatagactgtgtgatggcatttcagctcctgcct
gtgaagggaatatcaaacagcagcaaggatgtcaaatgggctcggtctggggcagctggg
aagctctga
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integrated database retrieval system
