Zootoca vivipara (common lizard): 118086700
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Entry
118086700 CDS
T07275
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118086700 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118086700 (POLB)
Enzymes [BR:
zvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118086700 (POLB)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
118086700 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
118086700 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
Cdd1
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
118086700
NCBI-ProteinID:
XP_034974539
LinkDB
All DBs
Position
LG6:92472023..92489574
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AA seq
335 aa
AA seq
DB search
MSKRKVPQENPNEGITDFLSELANYERNVNRAIHKYNAYRKAASVISKYPSKIKSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSSSINFLTRVSGIGPAAARKFVDEGIK
TLEDLKKNEHKLNHHQRIGLKYFEDFEKRIPRKEMLEMQEIVLSEVKKVDPTYIATVCGS
FRRGAESSGDMDILLTHPNFTSESSKQPKLLHQVVEQLENIHFITDTLSKGDTKFMGVCQ
LPSKDEETGYPYRRIDIRLIPRDQYYCGVLYFTGSDIFNKNMRTHALEMGFTLNEYTIRP
LGITGVAGEPLLVNSEKDIFDYIQWKYREPKERSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaggtgccacaggaaaaccccaacgagggcatcacggacttcctgagc
gaactggccaactatgagaggaatgtgaacagggccatccacaagtacaatgcttacagg
aaggcagcctctgtgatatcgaaatatccaagcaagatcaaaagtggagctgaagcaaag
aagctggatggagtcggagctaaaattgcagaaaagattgatgagtttttatctactgga
aaactacgaaagctggaaaagattcgacaggatgatacgagctcttctatcaatttcctg
accagagtcagcggcatagggcctgcggctgccaggaagtttgtggacgaaggaattaaa
actctggaagatctaaaaaaaaatgagcacaaactgaaccatcatcagcgaattggattg
aagtactttgaagactttgagaaaagaattcctcgtaaagagatgttagagatgcaggaa
atcgttttgagcgaggtaaagaaagtggaccccacatatattgctacagtgtgtggcagt
ttccgtcgaggtgcagaatcaagtggggacatggatattcttttgacccatccaaacttc
acttcagaatcctccaaacagccaaagcttttgcatcaagtggtcgaacaactggaaaac
atccacttcattacagatacgctttcgaagggagacaccaagttcatgggagtatgtcag
ctcccaagcaaagatgaggaaactggttacccttacaggaggattgatatcaggttgatt
cccagggatcagtattactgtggagttctgtacttcactggaagcgacatattcaacaag
aacatgagaacccatgctctggaaatgggcttcaccctcaatgaatacacaattcggccc
ttgggtatcaccggagttgctggggagcccctccttgtcaacagtgagaaggacatcttt
gactacatccagtggaagtatcgcgagccaaaggagcggagtgaataa
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integrated database retrieval system
