Zootoca vivipara (common lizard): 118096783
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Entry
118096783 CDS
T07275
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118096783 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118096783 (BARD1)
04121 Ubiquitin system [BR:
zvi04121
]
118096783 (BARD1)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118096783 (BARD1)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118096783 (BARD1)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
118096783 (BARD1)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
118096783 (BARD1)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118096783 (BARD1)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
118096783 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
NIBRIN_BRCT_II
zf-C3HC4_3
Prok-RING_4
zf-RING_UBOX
RTT107_BRCT_5
PTCB-BRCT
DUF716
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
118096783
NCBI-ProteinID:
XP_034994845
LinkDB
All DBs
Position
LG1:complement(128184632..128243011)
Genome browser
AA seq
781 aa
AA seq
DB search
MRAAALRERSGNQPAGRMEAEAEPRGVWWKETGAALGRLAEALSCSQCRDILKKPVNIGG
CEHVLCLNCVGDSSGTACPVCHVPAMVQDVKVNRQLDNIVKLHSKLQSLWGWDLSGSGEN
LSDPGDVVCETGSKKQKLKEDFNPCRKSKKLTMQKRPEKTEQAMKGQDDQPHAPASTHDF
SLSPTQEPFKKQKNPNLKQLRKKTLTDINSQRRSLKGRQKKTSGHDEESTNEAKVVFCSQ
SLDIPSPDPKSTSEHKSLMGAELAQGESEVSMDAIASVKLVEKSSRDNLSCSCGGMQENL
SSEECLLSRGKRTPLKCRRQSSRLPTPLHKHPSRKEHSTPGRLGLLKVSPRPSPKDSLGD
SSPTIDCIRCYPSTPSASSSPTMRSSEDACNQKTAEAAHLTNTAYQKEAQLTESFSRKAP
NSLPAKRNHKGETLLHIASVEGDLSAVKHLLESGADPNVKDYAGWTPLHEACNHGHKEVV
ELLLQHGALLNAAGYQNDLPLHDAVKNGHTSIVELLLLHGASRNVVNIFGHKPVDYAETE
NMKSLLMLPAKNDSSTTTQCPEQLSLNQPREGPVVLLGSGLNPVQQQLLSKLAKVLKARI
CTAFNSTVTHVVIPENSTRSTMKCMLAVLTGCWILTFQWVDACLKTSAREQEEKYEIDGG
AHQGRLNKEQLLPKLFDGCYFYFLGMFKEHSKDDLKELVKAGGGQILLRKPKSDSDVTQT
INTVAYHAEIASDQSSCTQYIIYDGSSNYKPEKIRQGKVWEAPSKWLIDCVVSFQLLPVK
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgcggcgctgagggagcgctccgggaaccagcccgcgggacggatggaggcc
gaggccgagccgcgaggcgtctggtggaaggagaccggcgcggccctggggcggctggcg
gaggccctcagctgctcgcagtgtcgggacattttgaagaaacctgtgaacataggaggc
tgtgaacatgtcttatgcctaaattgtgtgggtgacagcagtggaacagcctgcccagtg
tgtcatgtgccagccatggtacaagatgtgaaagtaaacaggcagctggacaacattgtc
aaactgcacagcaaactgcagagtctgtggggctgggacttatcaggttcaggagagaac
ctgtctgaccctggagatgtggtttgtgagacaggaagtaagaagcagaaactaaaagag
gacttcaatccttgtaggaagagcaagaaattgactatgcaaaagagaccagagaagaca
gaacaggccatgaagggccaggatgaccagcctcatgccccagcttccacccatgatttt
agtctttcccccactcaagagccttttaaaaagcaaaagaaccccaatctgaaacagctg
aggaaaaagactttaacagacatcaacagccagcggagatcgctcaaaggaagacagaaa
aagaccagtggacatgatgaagagagcacaaacgaagcaaaggtggtgttttgcagtcag
tcattggatatccccagtccagaccccaaaagcacatcggagcacaagtctctaatggga
gcagagcttgcacagggtgagagtgaagtcagtatggatgccattgcatctgtgaaactt
gtagagaagagcagcagggataacttgtcttgttcatgtggtggtatgcaggaaaacttg
agttctgaagagtgcctcctctccagaggaaaaaggactccactaaaatgtagaaggcaa
agcagcagattgcctactcctttacataaacaccccagcaggaaagagcatagcacccct
ggacgtttaggactgctgaaggtgtccccaaggccatcacccaaagattcccttggggat
tcttcgcccaccattgactgtataaggtgttatccatctacaccatctgctagctcttca
ccaacaatgagaagctctgaagatgcatgtaaccaaaaaactgccgaagcagcacatctg
accaatactgcttatcaaaaagaggcacagctaactgagtctttctccaggaaagctccc
aatagcctgccagccaagagaaatcataaaggggaaactttgctccacatcgcttccgtt
gagggtgatctttctgctgttaagcacttactggaaagtggagcagatcccaatgttaaa
gactatgctggatggactccactgcatgaagcttgtaatcatggacataaggaggtcgtg
gagctgttgctacaacatggggcactcctgaatgcggctgggtatcaaaatgatttgccg
cttcacgatgctgtcaagaatggacatacaagtattgttgaactactgcttctgcatgga
gcttctcgaaatgtagttaatatatttggtcacaaacctgtggattatgctgaaacagaa
aatatgaaatcacttctgatgctcccagcaaagaatgactcttctactactactcagtgt
ccagaacaattaagcctaaatcagcccagagaaggacctgttgttctccttggaagtggt
cttaatccagttcagcagcagttgttgagtaaattggcaaaggttctgaaagctagaata
tgtacggcatttaatagcacagtgacacatgttgttatccctgagaattctacacgcagt
actatgaagtgcatgctggctgttttgactggatgctggatcttgacatttcagtgggta
gatgcctgcctgaagacaagtgctcgggagcaagaagagaagtatgaaatagatggtggt
gcacaccaaggccgactgaacaaagagcagctgttgccaaagttgtttgatggctgctac
ttctattttttgggaatgtttaaggagcacagcaaagatgatctgaaggaattggtgaaa
gcaggtggaggacagatactgctgaggaaacccaaatcggatagtgatgtgacacagaca
atcaatactgtagcctatcatgctgagattgcttctgaccagagttcctgcacacagtat
ataatctatgatggctcttctaactacaagccagagaaaattcggcaaggaaaggtttgg
gaggcgccgtctaaatggcttatagactgtgtcgtgtcatttcagctattacctgttaag
aaataa
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