Homo sapiens (human): 57724 Help Entry 57724             CDS       T01001                                  Symbol EPG5, HEEW1, KIAA1632, VICIS Name (RefSeq) ectopic P-granules 5 autophagy tethering factor   KO K23883   ectopic P granules protein 5 Organism hsa  Homo sapiens (human) Pathway hsa04140   Autophagy - animal Network nt06532  Autophagy   Element N01721   Autophagosome and lysosome fusion, tethering factor Disease H02133   Vici syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     57724 (EPG5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     57724 (EPG5) Membrane trafficking [BR:hsa04131]  Autophagy   Other autophagy associated proteins    Others     57724 (EPG5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF6077 Sda Motif Other DBs NCBI-GeneID:  57724 NCBI-ProteinID:  NP_066015 OMIM:  615068 HGNC:  29331 Ensembl:  ENSG00000152223 UniProt:  Q9HCE0 Q9BTI0 Structure PDB LinkDB All DBs Position 18:complement(45800581..45967329) Genome browser AA seq 2579 aa AA seqDB search MAEAVKPQRRAKAKASRTKTKEKKKYETPQREESSEVSLPKTSREQEIPSLACEFKGDHL KVVTDSQLQDDASGQNESEMFDVPLTSLTISNEESLTCNTEPPKEGGEARPCVGDSAVTP KVHPGDNVGTKVETPKNFTEVEENMSVQGGLSESAPQSNFSYTQPAMENIQVRETQNSKE DKQGLVCSSEVPQNVGLQSSCPAKHGFQTPRVKKLYPQLPAEIAGEAPALVAVKPLLRSE RLYPELPSQLELVPFTKEQLKILEPGSWLENVESYLEEFDSMAHQDRHEFYELLLNYSRC RKQLLLAEAELLTLTSDCQNAKSRLWQFKEEQMSVQGICADQVKVFSYHRYQRVEMNENA LVELKKLFDAKSEHLHQTLALHSYTSVLSRLQVESYIYALLSSSAVLRSSAIHQQGRASK QTESIPSDLCQLKECISVLFMFTRRVNEDTQFHDDILLWLQKLVSVLQRVGCPGDHLFLL NHILRCPAGVSKWAVPFIQIKVLHNPSGVFHFMQSLALLMSPVKNRAEFMCHMKPSERKP SSSGPGSGTWTLVDEGGEEDEDPETSWILLNEDDLVTILAQFPFHELFQHLLGFKAKGDY LPETTRPQEMMKIFAFANSLVELLAVGLETFNRARYRQFVKRIGYMIRMTLGYVSDHWAQ YVSHNQGSGLAQQPYSMEKLQVEFDELFLRAVLHVLKAKRLGIWLFMSEMPFGTLSVQML WKLFYLMHQVESENLQQLSSSLQPAQCKQQLQDPEHFTNFEKCLSSMNSSEEICLLTTFA QMAQARRTNVDEDFIKIIVLEIYEVSYVTLSTRETFSKVGRELLGTITAVHPEIISVLLD RVQETIDQVGMVSLYLFKELPLYLWQPSASEIAVIRDWLLNYNLTVVKNKLACVILEGLN WGFAKQATLHLDQAVHAEVALMVLEAYQKYLAQKPYAGILSESMKQVSYLASIVRYGETP ETSFNQWAWNLILRLKLHKNDYGIQPNCPAVPFSVTVPDMTESPTFHPLLKAVKAGMPIG CYLALSMTAVGHSIEKFCAEGIPLLGILVQSRHLRTVVHVLDKILPLFYPCQYYLLKNEQ FLSHLLLFLHLDSGVPQGVTQQVTHKVAQHLTGASHGDNVKLLNSMIQAHISVSTQPNEV GPVAVLEFWVQALISQHLWYREQPILFLMDHLCKAAFQLMQEDCIQKLLYQQHKNALGYH CDRSLLSSLVSWIVAGNITPSFVEGLATPTQVWFAWTVLNMESIFEEDSQLRRVIEGELV INSAFTPDQALKKAQTQLKLPIVPSLQRLLIYRWAHQALVTPSDHPLLPLIWQKFFLLYL HRPGPQYGLPIDGCIGRRFFQSPAHINLLKEMKRRLTEVADFHHAASKALRVPAEGSEGL PESHSGTPGYLTSPELHKELVRLFNVYILWLEDENFQKGDTYIPSLPKHYDIHRLAKVMQ NQQDLWMEYLNMERIYHEFQETVGLWTQAKLESHSTPCSLSVQLDFTDPLLAKERVLSNL RKHEAPQPPLALHPTKPPVPVISSAVLLSQKDATQLVCTDLNLLQQQARTAALRESQQVA LDGELLDTMPKQYVNREEQTTLHLECRGSSGKKCQGAAVVTVQFEGMHKNEAISQQLHVL RKEVKQLQAEAAKPPSLNIVEAAVHAENLITALVNAYKLQPTPGIQKVGISLFFTIVDYV SDETQRHPPTRQFFTSCIEILGQVFISGIKSECRKVLETILKNSRLCSLLSPFFTPNAAP AEFIQLYEQVVKFLSEDNSDMIFMLLTKFDLKQWLSATKPPLSDRTRLLESIHLALTAWG LEPDEDILMPFNLFCKHWTYLLLYQFPDQYSDILRLLMQSSAEQLLSPECWKATLRALGC CAPSCQQGAASTEGAVLPSSSDALLSDKQVMETIQWLSDFFYKLRLSKMDFKSFGLFSKW SPYMADVKTFLGYLVKRLIDLEMTCLAQDPTASRKTVLKSLHSVIIQLFKPWILVLEDNE SSQQRHYPWLESDTVVASSIVQLFTDCIDSLHESFKDKLLPGDAGALWLHLMHYCEACTA PKMPEFILYAFHSTYRKLPWKDLHPDQMLMEAFFKVERGSPKSCFLFLGSVLCEVNWVSV LSDAWNSSPHPETRSMIVCLLFMMILLAKEVQLVDQTDSPLLSLLGQTSSLSWHLVDIVS YQSVLSYFSSHYPPSIILAKESYAELIMKLLKVSAGLSIPTDSQKHLDAVPKCQAFTHQM VQFLSTLEQNGKITLAVLEQEMSKLLDDIIVFNPPDMDSQTRHMALSSLFMEVLMMMNNA TIPTAEFLRGSIRTWIGQKMHGLVVLPLLTAACQSLASVRHMAETTEACITAYFKESPLN QNSGWGPILVSLQVPELTMEEFLQECLTLGSYLTLYVYLLQCLNSEQTLRNEMKVLLILS KWLEQVYPSSVEEEAKLFLWWHQVLQLSLIQTEQNDSVLTESVIRILLLVQSRQNLVAEE RLSSGILGAIGFGRKSPLSNRFRVVARSMAAFLSVQVPMEDQIRLRPGSELHLTPKAQQA LNALESMASSKQYVEYQDQILQATQFIRHPGHCLQDGKSFLALLVNCLYPEVHYLDHIR NT seq 7740 nt NT seq  +upstreamnt  +downstreamnt atggccgaggcggtgaagccccagcgccgggccaaggccaaggccagccggactaaaaca aaggaaaagaagaagtatgaaactcctcagagggaagagtccagtgaagtctcccttcca aaaacctccagagagcaggaaatcccttctctagcctgtgaattcaaaggagaccatctg aaggtggtaactgattcccagctccaggatgatgccagtggacaaaatgagagtgaaatg tttgatgtaccactcacctccttaactataagcaatgaagagtccctgacgtgtaacaca gagcccccaaaggaagggggagaggccagaccctgtgtgggggacagtgcagtcactcca aaggtccaccctggagacaatgttggaactaaagtagaaacccccaagaacttcacagag gtagaggaaaatatgtcggtacaaggtggactttcagaaagtgcaccccaatctaatttt tcttatactcagccagcaatggaaaatatacaagtcagagaaactcagaatagtaaagaa gacaaacaaggcctggtttgttcttcagaggtgccacagaatgttggcttgcagagttct tgcccagccaaacatggttttcagacacctagagtgaagaaactgtatccccagttgcca gctgaaattgctggagaagcaccagctttggtggcagtgaaacccttgcttcgcagtgag cgactctacccagaactcccgtctcaactggaactagtaccatttactaaagaacagcta aaaatcttggagcctggttcatggctggaaaatgttgagtcatatttagaagaatttgac agcatggctcatcaagacaggcatgaattttatgagttgcttttgaactactcacgatgt aggaagcaactgctgctggctgaagctgagctgcttactctgacatctgattgccaaaat gctaaaagtcggctgtggcagtttaaggaggaacaaatgtctgtacagggtatctgtgca gatcaagtgaaagttttcagctatcatcgctaccaaagagtagaaatgaatgaaaatgca ctggtggagctaaagaagctattcgatgccaaatctgagcacctccaccagaccctggcc cttcattcttatacttctgtgctctcaagattgcaagtggagtcttacatctatgcattg ctcagtagttcagctgttctgagatcttcagcaattcaccagcaaggccgagcgtctaag cagacagaaagcattccctctgatctgtgtcaactaaaggaatgcattagtgtcttattc atgttcaccaggagagttaatgaagatactcagtttcatgatgatattcttctctggctg cagaaattggtatccgtgctacaaagagttggctgtcctggagatcacctcttccttcta aaccatattcttcgatgccccgctggtgttagtaaatgggctgttccttttatccagatc aaagtgttgcataacccatcaggggtctttcattttatgcaatcccttgccctgctgatg tctcctgtcaaaaatcgagctgagtttatgtgccacatgaagcccagcgagcggaagcca tcctcctcagggcctgggtctgggacttggacgctagtagacgaaggaggagaagaggat gaagaccctgagaccagttggattctccttaatgaagatgatttggttaccattttagca cagttcccctttcatgaactctttcagcatcttcttgggtttaaagcaaaaggtgattat ttacctgaaacaacaagacctcaagagatgatgaaaatttttgcctttgccaactcacta gtggaacttctggctgtggggttagaaacctttaatagagcacgctataggcagtttgtg aagcgaattggttatatgatcaggatgactcttggttatgtaagtgaccattgggcacag tatgtgagccataaccaaggctcaggattggcccaacagccctactctatggagaaacta caggttgaatttgatgaactgtttttgagggctgtcctacatgtgctgaaggccaaaaga cttggcatttggctgtttatgtccgagatgccctttgggactctgtctgtgcaaatgctg tggaagctcttctacctcatgcaccaggtggagagcgagaacctgcagcagctctcctcc tccctgcagcccgcccagtgcaagcagcagctccaagacccagaacattttaccaacttt gagaagtgtctttcttctatgaatagctcagaagagatttgccttctgactacctttgct cagatggctcaggccagaagaaccaatgtggacgaagacttcataaaaattattgttctg gagatatatgaggtatcttatgtcaccttgtctaccagagagactttttcaaaggttggt cgagagcttttagggactatcacagctgttcaccctgagataatttccgtccttctggat agagttcaagagaccattgaccaggttggaatggtttctctatacttgtttaaagaactg cctttgtatctttggcaaccttctgcatctgagatagcggtgattcgggattggttattg aattacaacctgacagtggtgaagaataaactggcctgtgttattcttgaaggactgaat tggggatttgctaaacaggctacccttcatctggatcaagcagtccatgctgaagtggct ttaatggttcttgaagcttatcagaagtaccttgcacagaagccatatgctgggattctc tctgaaagtatgaagcaggtttcatatttggccagtattgttcgatatggagagacaccc gagacctcatttaaccaatgggcctggaatttaatcttgaggctaaaactgcacaaaaac gattatggaatacagccgaattgtccagctgttcccttctccgtcactgtgcctgacatg acagagtcacccacgtttcatcctctcttgaaggctgtgaaagcgggcatgcccattggc tgttatctagccttatctatgacagctgtgggccacagcattgagaagttctgtgcagaa ggcatcccactattgggaattctggtccagtcaagacatttgagaacagtggttcatgtc ctggataagattctgcctttattttacccttgccagtattaccttctgaagaatgagcag tttttatcgcatctcctcttgttcctacacttggacagcggtgtccctcagggtgtcaca caacaggtcacccacaaggtggcacagcacctgacaggagccagccatggggacaacgtg aagcttctcaacagcatgatccaggcacacatatctgtaagcactcagcccaatgaagtg ggccccgttgctgtgttggagttctgggttcaggctctcataagccagcatctctggtac cgagaacaacctatcctcttcctcatggaccacttgtgtaaagcagcttttcagctgatg caggaagactgcatacagaaattactctaccaacaacataagaatgccttgggttaccac tgtgaccggagtctgctctcatctttggtaagctggattgtggcaggcaacatcactcct tcctttgtggagggcttggccacgcccactcaggtctggtttgcctggacagtgctcaac atggaatccatctttgaagaggactcccagctccggagagttattgaaggggaattggtg ataaactctgctttcacccctgaccaagctctgaagaaagcccagacccagctgaagctc cccatcgtgccatccctccagaggctgctgatttatcgctgggcccaccaggctctggtc acaccttctgatcaccccctcctgccactcatttggcagaagttcttccttctgtatctt caccgtccgggaccacagtatgggttacccatagatggttgtattggaagaaggtttttt caaagtcctgctcatatcaatttgttgaaagaaatgaagagacgtttgaccgaggtggct gacttccaccatgctgcaagcaaggccctccgtgttccagcagagggcagtgaagggctg ccagagagccactctggcacccctggttacctgacttcaccagaactgcacaaggagctg gtgaggctcttcaatgtatatatattatggctagaagatgagaattttcaaaaaggagat acctatatcccttctctaccaaagcattatgatattcacaggctagcaaaagtgatgcag aatcagcaggatctgtggatggagtatttgaacatggagcgcatctatcatgagtttcag gagactgttggtctgtggacacaggccaagcttgagtcccattccacaccctgcagtttg tccgtgcagctggacttcactgatcctttgctggctaaagaaagggttttaagtaacttg cggaagcatgaggctccccagcctccccttgctctgcacccgacgaagcctcctgtgcca gttatttcctctgctgtgctattgagtcagaaggacgccacccagctggtgtgcacagac ctgaatctgttgcaacagcaggccagaaccgcagctcttcgggaatctcagcaggttgct ctggatggtgagctgttagacacaatgccaaagcagtatgtgaatcgtgaagaacagacc acactacatttggagtgcagaggcagcagcggtaagaaatgccaaggagccgcagttgtc acggttcagtttgaaggcatgcataagaatgaagccataagccaacagcttcatgtttta cggaaggaagtgaagcagttgcaagcagaagctgctaaaccaccatcacttaatattgtg gaagctgctgtacatgcagaaaacttgatcacggccttagtgaatgcctacaagttgcag cctacacctgggattcagaaagttggcattagccttttctttactattgtggattacgtc agcgatgagacgcagcgtcatcccccaacaaggcagttctttacttcatgtattgagatc ttgggacaggtatttatcagtggcattaaatcagagtgcagaaaagtacttgaaaccatt ctgaagaacagcaggctctgctccctgctgtctcctttcttcactcccaatgctgcacct gcagagttcatacagctgtatgagcaagtggtgaagtttctaagtgaggacaacagtgat atgattttcatgctgctaaccaagttcgatcttaaacaatggttaagcgccactaaacct cctctgtctgatcgtaccaggcttctggagtccattcacttggcacttactgcctggggc cttgaaccagatgaggatattttgatgccatttaatcttttctgtaagcactggacttat cttcttctctaccagtttcctgaccagtacagtgacattctcaggctgcttatgcaaagc tccgcggagcagcttctgagccccgagtgttggaaggccactctgagagccctgggctgc tgcgcccccagctgccagcagggggcagcgtccaccgagggcgccgtgcttcccagctct tctgatgctctcttgtcagacaagcaggtaatggagactatacagtggctttcagacttt ttttataagcttcggttatccaagatggactttaaaagctttggtttattctcaaaatgg agtccttatatggctgatgtgaagacattcttgggctaccttgtgaaaaggctgattgac ttagaaatgacctgtttggcccaagacccaactgccagcaggaaaacagtgctgaaatcc ctacattcagtaatcattcagctctttaagccatggatcctggttttagaggacaacgaa agcagccaacagcggcattacccctggctagagagtgatactgtggtggcctcaagcatt gtgcagctgttcactgactgtattgactcactgcatgagagttttaaagataagctgttg ccaggtgatgcaggagccctttggttgcacctgatgcattattgtgaagcatgtacagca cccaaaatgccagagttcattctgtacgctttccatagcacgtaccggaaactgccatgg aaggacctgcaccctgaccagatgctcatggaggccttcttcaaagtggaacgaggaagc cccaagagctgtttcttatttttggggtctgtactctgtgaagtcaactgggttagtgtg ctctctgatgcctggaattccagtccccacccagaaacccgcagcatgattgtctgcctc cttttcatgatgattttattggcaaaggaagttcaactggtagaccaaacagattcacct ttacttagtctccttggacagacaagctcactttcatggcatcttgtggatattgtgtcg taccagagtgtgctaagttatttcagcagccattacccgccgtccatcatcctggcaaaa gaatcttatgctgaattaatcatgaagctcctaaaagtgtctgcgggcctttctattcct actgacagccagaagcatcttgatgcagttccaaaatgccaagcttttactcatcagatg gttcaattcctcagcaccctggaacaaaatggaaaaatcaccttagcagtcctagaacag gaaatgtctaagctcttagacgatatcattgtctttaacccgcccgacatggacagccag acccgccacatggccctcagcagcctctttatggaagtcctgatgatgatgaacaacgcg actattccaacagcagagttccttcggggcagtatccggacctggattggccaaaaaatg catgggctggtggtgctgccccttttaacagcagcctgccagagcctggcgtccgtccgc cacatggctgagactacagaagcctgcatcactgcctacttcaaagaaagccctctcaat cagaattcaggatggggacccattctggtatcccttcaggttcccgagctcaccatggaa gagttcctgcaggagtgcctcaccttgggcagttacttgactctttacgtctacttgctt cagtgtttaaacagcgaacagactttaaggaatgaaatgaaagtgctgctcatcttaagc aagtggctggaacaggtgtacccaagctccgtggaggaagaggcaaagctgtttttgtgg tggcaccaagtccttcagctctccctcattcagacagagcagaatgactccgtcctgaca gaatctgtcattcgaattctgctcttggttcagagcaggcagaacctcgtggctgaggag agactcagctctgggatcctgggggcaattgggtttggccggaagtcgcctttgtctaac aggttccgagtggttgcccgaagcatggctgccttcctttcagttcaggttcctatggaa gatcagatccgtttgaggcctggctctgaattacatctgacccccaaagctcagcaggct ctgaatgctcttgaatccatggcatcaagtaagcagtatgttgaataccaggatcaaata ttgcaagccacccaatttataaggcatcctggccattgccttcaagatgggaaaagcttc ttggctcttctcgttaactgtctgtatccagaagtgcattatttggaccacatacgatag

Homo sapiens (human): 9842 Help Entry 9842              CDS       T01001                                  Symbol PLEKHM1, AP162, B2, OPTA3, OPTB6 Name (RefSeq) pleckstrin homology and RUN domain containing M1   KO K23282   pleckstrin homology domain-containing family M member 1 Organism hsa  Homo sapiens (human) Pathway hsa04140   Autophagy - animal hsa05132   Salmonella infection Network nt06181  Salmonella nt06532  Autophagy   Element N01300   Tethering of late endosomes and lysosomes N01301   Salmonella SifA to Tethering of late endosomes and lysosomes N01721   Autophagosome and lysosome fusion, tethering factor Disease H00436   Osteopetrosis Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     9842 (PLEKHM1)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     9842 (PLEKHM1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     9842 (PLEKHM1)   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]     9842 (PLEKHM1) Membrane trafficking [BR:hsa04131]  SNARE   SNARE associated proteins    Others     9842 (PLEKHM1) Domain-containing proteins not elsewhere classified [BR:hsa04990]  Pleckstrin homology (PH) domain-containing proteins   Other PH domain-containing proteins    9842 (PLEKHM1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RH_dom RUN PH DUF2072 Prok-RING_1 Motif Other DBs NCBI-GeneID:  9842 NCBI-ProteinID:  NP_055613 OMIM:  611466 HGNC:  29017 Ensembl:  ENSG00000225190 UniProt:  Q9Y4G2 Structure PDB LinkDB All DBs Position 17:complement(45434209..45490721) Genome browser AA seq 1056 aa AA seqDB search MLSVVENGLDPQAAIPVIKKKLVGSVKALQKQYVSLDTVVTSEDGDANTMCSALEAVFIH GLHAKHIRAEAGGKRKKSAHQKPLPQPVFWPLLKAVTHKHIISELEHLTFVNTDVGRCRA WLRLALNDGLMECYLKLLLQEQARLHEYYQPTALLRDAEEGEFLLSFLQGLTSLSFELSY KSAILNEWTLTPLALSGLCPLSELDPLSTSGAELQRKESLDSISHSSGSEDIEVHHSGHK IRRNQKLTASSLSLDTASSSQLSCSLNSDSCLLQENGSKSPDHCEEPMSCDSDLGTANAE DSDRSLQEVLLEFSKAQVNSVPTNGLSQETEIPTPQASLSLHGLNTSTYLHCEAPAEPLP AQAASGTQDGVHVQEPRPQAPSPLDLQQPVESTSGQQPSSTVSETAREVGQGNGLQKAQA HDGAGLKLVVSSPTSPKNKSWISEDDFYRPSREQPLESASDHPIASYRGTPGSRPGLHRH FSQEPRKNCSLGALDQACVPSPGRRQAQAAPSQGHKSFRVVHRRQMGLSNPFRGLMKLGT VERRGAMGIWKELFCELSPLEFRLYLSNEEHTCVENCSLLRCESVGPAHSDGRFELVFSG KKLALRASSQDEAEDWLDRVREALQKVRPQQEDEWVNVQYPDQPEEPPEAPQGCLSPSDL LSEPAALQGTQFDWSSAQVPEPDAIKESLLYLYMDRTWMPYIFSLSLEALKCFRIRNNEK MLSDSHGVETIRDILPDTSLGGPSFFKIITAKAVLKLQAGNAEEAALWRDLVRKVLASYL ETAEEAVTLGGSLDENCQEVLKFATRENGFLLQYLVAIPMEKGLDSQGCFCAGCSRQIGF SFVRPKLCAFSGLYYCDICHQDDASVIPARIIHNWDLTKRPICRQALKFLTQIRAQPLIN LQMVNASLYEHVERMHLIGRRREQLKLLGDYLGLCRSGALKELSKRLNHRNYLLESPHRF SVADLQQIADGVYEGFLKALIEFASQHVYHCDLCTQRGFICQICQHHDIIFPFEFDTTVR CAECKTVFHQSCQAVVKKGCPRCARRRKYQEQNIFA NT seq 3171 nt NT seq  +upstreamnt  +downstreamnt atgctttcagtggtggagaatggactggacccccaggctgccatcccggtcatcaagaag aagctggtgggatccgtgaaggccttgcagaagcagtacgtgtccctggacacggtggtc actagtgaagacggagatgccaacaccatgtgcagcgccctggaggccgtatttatccat ggcctgcacgccaagcacatccgagctgaggccggaggaaaaaggaagaaaagtgcccac cagaagcctctgccccagcctgtcttctggcccctcctgaaagctgtcacccacaaacac atcatctcagagttggagcacctgacgtttgtcaacacggatgtgggccgctgccgggca tggctgcggctggccctgaacgatggcctgatggagtgctacctgaagctgctgctgcag gagcaggcccgcttgcatgagtactaccagcccaccgccctgctccgggatgctgaggag ggcgagttcctccttagcttcctgcagggcctcacgtccttgtccttcgaactctcctac aagtctgccatcttaaatgagtggacgctcaccccattggccctgtctgggctttgcccg ctttctgagctggaccctctctctacctctggtgcagaactacagcggaaggaatctctg gattccatttcccattcttcaggctctgaagacatcgaagtccatcactcgggccataag atacggaggaaccagaagctgactgcctcctccctcagcctggacacggccagttcatcc cagctgtcctgcagcctaaactctgatagctgcttactccaagagaatggctccaagagt ccagaccattgcgaggagcccatgtcctgtgactcagacctgggcacagcaaatgctgag gactcagaccggtctctgcaagaggtattgttggaattcagcaaagcccaggtaaactct gtgccaaccaacggactgagccaagaaacagagatccccacaccacaggcctcgctctcc ctccatggcctcaacaccagcacatacctgcactgtgaggcacctgcagagccccttcct gcccaggcagcctctggaactcaagatggtgtccacgtgcaggagccgcgtccccaggcg cccagccccctggacttacagcagcctgtagagagcacctcaggccagcagccttctagt actgtcagcgagacagccagagaagtgggccaagggaatggcctgcagaaggcccaggct catgacggagctggtctgaagctggtagtttcctcacccaccagtccgaaaaacaagagc tggatctcagaggatgacttctaccggccttcccgggagcaacccctggagagtgcttca gaccacccaatagcttcttacagggggactccagggtcaaggcctggtctccacaggcat ttttctcaagaaccaagaaaaaactgctccctgggggcgttagaccaagcgtgtgtacct tccccaggaagaaggcaagcccaggcagccccatcccaggggcataagagcttccgggtg gtacaccggagacagatgggactgtccaacccattccggggtctcatgaagctgggcacc gtggagcggcggggggcaatgggcatctggaaggagctcttctgcgagctctccccgctg gagttccgcctctacctgagcaacgaggagcacacctgtgtggagaactgctcgctgctt cgctgtgagtctgtggggccagcccatagtgatgggcgctttgagctggtcttctctggc aagaagctggccctgcgcgcctcctcccaggacgaagctgaggactggctggaccgggtg cgggaggccctgcagaaggtccggcctcagcaggaggatgagtgggtgaacgtgcagtac ccagaccagcctgaggaaccccccgaggcgccccagggctgcctctctccctcagacctg ctctcggagcccgcggccctccagggcacacagtttgactggtcgtccgcccaggttcca gagccagatgccatcaaggagtccctgctgtacttgtacatggacaggacctggatgccc tatatattttctctgtccttggaggctctgaaatgtttccgcatcaggaacaatgagaag atgctgagtgacagccacggcgtggagaccatccgggacatcctgccagacaccagcctt gggggcccatccttcttcaaaatcatcacggccaaggctgtcctgaagctgcaggccgga aacgccgaggaagccgccctgtggagggatctggtccgcaaagtcctggcatcctacttg gagacagccgaggaggcggtgaccctgggcgggagcctggatgaaaactgtcaggaggtg ctgaaatttgccacccgggagaatggcttcctgctgcagtacctggtggctatccccatg gagaaaggccttgactcccaaggctgcttctgcgcaggctgctcccggcagatcggcttc tcctttgtacgacccaagctctgtgccttctctggcctctattactgtgacatctgccac caagacgatgcctcagtgattccggccaggatcatccacaactgggacctcaccaagcgc ccgatctgcaggcaggccctgaagtttctgacacagatccgggcccagcccctcatcaac ctgcagatggtgaacgcgtctctgtacgagcatgtggagcggatgcacctcattgggagg agacgggagcagctgaagctcctgggggattacctgggcctgtgccggagtggcgccctg aaggagctcagcaagaggctcaaccacaggaattatctcttggaatctccgcataggttc agtgttgctgacctccaacagatcgcagacggggtgtatgaaggattcctcaaggccctg attgaatttgcctcccagcatgtctaccactgcgacctgtgcacccagcgcggcttcatc tgccagatctgccagcaccacgacatcatcttcccctttgagtttgacaccacagtcagg tgtgccgagtgcaagaccgtcttccaccagagctgccaggctgtggtgaagaagggctgc ccccgctgtgcccgccggcgcaagtaccaggaacagaacattttcgcctga

Homo sapiens (human): 57448 Help Entry 57448             CDS       T01001                                  Symbol BIRC6, APOLLON, BRUCE Name (RefSeq) baculoviral IAP repeat containing 6   KO K10586   baculoviral IAP repeat-containing protein 6 (apollon) [EC:2.3.2.23] Organism hsa  Homo sapiens (human) Pathway hsa04120   Ubiquitin mediated proteolysis hsa04140   Autophagy - animal hsa04215   Apoptosis - multiple species Network nt06532  Autophagy   Element N01721   Autophagosome and lysosome fusion, tethering factor Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     57448 (BIRC6)  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     57448 (BIRC6)   09143 Cell growth and death    04215 Apoptosis - multiple species     57448 (BIRC6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:hsa01002]     57448 (BIRC6)   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:hsa04121]     57448 (BIRC6) Enzymes [BR:hsa01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.23  E2 ubiquitin-conjugating enzyme      57448 (BIRC6) Peptidases and inhibitors [BR:hsa01002]  Peptidase inhibitors   Family I32: IAP family    57448 (BIRC6) Ubiquitin system [BR:hsa04121]  Ubiquitin-conjugating enzymes (E2)   Ubiquitin-conjugating enzymes    57448 (BIRC6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  BIRC6 UQ_con BIR UEV RWD Motif Other DBs NCBI-GeneID:  57448 NCBI-ProteinID:  NP_057336 OMIM:  605638 HGNC:  13516 Ensembl:  ENSG00000115760 UniProt:  Q9NR09 Structure PDB LinkDB All DBs Position 2:32357023..32618878 Genome browser AA seq 4857 aa AA seqDB search MVTGGGAAPPGTVTEPLPSVIVLSAGRKMAAAAAAASGPGCSSAAGAGAAGVSEWLVLRD GCMHCDADGLHSLSYHPALNAILAVTSRGTIKVIDGTSGATLQASALSAKPGGQVKCQYI SAVDKVIFVDDYAVGCRKDLNGILLLDTALQTPVSKQDDVVQLELPVTEAQQLLSACLEK VDISSTEGYDLFITQLKDGLKNTSHETAANHKVAKWATVTFHLPHHVLKSIASAIVNELK KINQNVAALPVASSVMDRLSYLLPSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVG YRWAQPDPMAQAGFYHQPASSGDDRAMCFTCSVCLVCWEPTDEPWSEHERHSPNCPFVKG EHTQNVPLSVTLATSPAQFPCTDGTDRISCFGSGSCPHFLAAATKRGKICIWDVSKLMKV HLKFEINAYDPAIVQQLILSGDPSSGVDSRRPTLAWLEDSSSCSDIPKLEGDSDDLLEDS DSEEHSRSDSVTGHTSQKEAMEVSLDITALSILQQPEKLQWEIVANVLEDTVKDLEELGA NPCLTNSKSEKTKEKHQEQHNIPFPCLLAGGLLTYKSPATSPISSNSHRSLDGLSRTQGE SISEQGSTDNESCTNSELNSPLVRRTLPVLLLYSIKESDEKAGKIFSQMNNIMSKSLHDD GFTVPQIIEMELDSQEQLLLQDPPVTYIQQFADAAANLTSPDSEKWNSVFPKPGTLVQCL RLPKFAEEENLCIDSITPCADGIHLLVGLRTCPVESLSAINQVEALNNLNKLNSALCNRR KGELESNLAVVNGANISVIQHESPADVQTPLIIQPEQRNVSGGYLVLYKMNYATRIVTLE EEPIKIQHIKDPQDTITSLILLPPDILDNREDDCEEPIEDMQLTSKNGFEREKTSDISTL GHLVITTQGGYVKILDLSNFEILAKVEPPKKEGTEEQDTFVSVIYCSGTDRLCACTKGGE LHFLQIGGTCDDIDEADILVDGSLSKGIEPSSEGSKPLSNPSSPGISGVDLLVDQPFTLE ILTSLVELTRFETLTPRFSATVPPCWVEVQQEQQQRRHPQHLHQQHHGDAAQHTRTWKLQ TDSNSWDEHVFELVLPKACMVGHVDFKFVLNSNITNIPQIQVTLLKNKAPGLGKVNALNI EVEQNGKPSLVDLNEEMQHMDVEESQCLRLCPFLEDHKEDILCGPVWLASGLDLSGHAGM LTLTSPKLVKGMAGGKYRSFLIHVKAVNERGTEEICNGGMRPVVRLPSLKHQSNKGYSLA SLLAKVAAGKEKSSNVKNENTSGTRKSENLRGCDLLQEVSVTIRRFKKTSISKERVQRCA MLQFSEFHEKLLNTLCRKTDDGQITEHAQSLVLDTLCWLAGVHSNGPGSSKEGNENLLSK TRKFLSDIVRVCFFEAGRSIAHKCARFLALCISNGKCDPCQPAFGPVLLKALLDNMSFLP AATTGGSVYWYFVLLNYVKDEDLAGCSTACASLLTAVSRQLQDRLTPMEALLQTRYGLYS SPFDPVLFDLEMSGSSCKNVYNSSIGVQSDEIDLSDVLSGNGKVSSCTAAEGSFTSLTGL LEVEPLHFTCVSTSDGTRIERDDAMSSFGVTPAVGGLSSGTVGEASTALSSAAQVALQSL SHAMASAEQQLQVLQEKQQQLLKLQQQKAKLEAKLHQTTAAAAAAASAVGPVHNSVPSNP VAAPGFFIHPSDVIPPTPKTTPLFMTPPLTPPNEAVSVVINAELAQLFPGSVIDPPAVNL AAHNKNSNKSRMNPLGSGLALAISHASHFLQPPPHQSIIIERMHSGARRFVTLDFGRPIL LTDVLIPTCGDLASLSIDIWTLGEEVDGRRLVVATDISTHSLILHDLIPPPVCRFMKITV IGRYGSTNARAKIPLGFYYGHTYILPWESELKLMHDPLKGEGESANQPEIDQHLAMMVAL QEDIQCRYNLACHRLETLLQSIDLPPLNSANNAQYFLRKPDKAVEEDSRVFSAYQDCIQL QLQLNLAHNAVQRLKVALGASRKMLSETSNPEDLIQTSSTEQLRTIIRYLLDTLLSLLHA SNGHSVPAVLQSTFHAQACEELFKHLCISGTPKIRLHTGLLLVQLCGGERWWGQFLSNVL QELYNSEQLLIFPQDRVFMLLSCIGQRSLSNSGVLESLLNLLDNLLSPLQPQLPMHRRTE GVLDIPMISWVVMLVSRLLDYVATVEDEAAAAKKPLNGNQWSFINNNLHTQSLNRSSKGS SSLDRLYSRKIRKQLVHHKQQLNLLKAKQKALVEQMEKEKIQSNKGSSYKLLVEQAKLKQ ATSKHFKDLIRLRRTAEWSRSNLDTEVTTAKESPEIEPLPFTLAHERCISVVQKLVLFLL SMDFTCHADLLLFVCKVLARIANATRPTIHLCEIVNEPQLERLLLLLVGTDFNRGDISWG GAWAQYSLTCMLQDILAGELLAPVAAEAMEEGTVGDDVGATAGDSDDSLQQSSVQLLETI DEPLTHDITGAPPLSSLEKDKEIDLELLQDLMEVDIDPLDIDLEKDPLAAKVFKPISSTW YDYWGADYGTYNYNPYIGGLGIPVAKPPANTEKNGSQTVSVSVSQALDARLEVGLEQQAE LMLKMMSTLEADSILQALTNTSPTLSQSPTGTDDSLLGGLQAANQTSQLIIQLSSVPMLN VCFNKLFSMLQVHHVQLESLLQLWLTLSLNSSSTGNKENGADIFLYNANRIPVISLNQAS ITSFLTVLAWYPNTLLRTWCLVLHSLTLMTNMQLNSGSSSAIGTQESTAHLLVSDPNLIH VLVKFLSGTSPHGTNQHSPQVGPTATQAMQEFLTRLQVHLSSTCPQIFSEFLLKLIHILS TERGAFQTGQGPLDAQVKLLEFTLEQNFEVVSVSTISAVIESVTFLVHHYITCSDKVMSR SGSDSSVGARACFGGLFANLIRPGDAKAVCGEMTRDQLMFDLLKLVNILVQLPLSGNREY SARVSVTTNTTDSVSDEEKVSGGKDGNGSSTSVQGSPAYVADLVLANQQIMSQILSALGL CNSSAMAMIIGASGLHLTKHENFHGGLDAISVGDGLFTILTTLSKKASTVHMMLQPILTY MACGYMGRQGSLATCQLSEPLLWFILRVLDTSDALKAFHDMGGVQLICNNMVTSTRAIVN TARSMVSTIMKFLDSGPNKAVDSTLKTRILASEPDNAEGIHNFAPLGTITSSSPTAQPAE VLLQATPPHRRARSAAWSYIFLPEEAWCDLTIHLPAAVLLKEIHIQPHLASLATCPSSVS VEVSADGVNMLPLSTPVVTSGLTYIKIQLVKAEVASAVCLRLHRPRDASTLGLSQIKLLG LTAFGTTSSATVNNPFLPSEDQVSKTSIGWLRLLHHCLTHISDLEGMMASAAAPTANLLQ TCAALLMSPYCGMHSPNIEVVLVKIGLQSTRIGLKLIDILLRNCAASGSDPTDLNSPLLF GRLNGLSSDSTIDILYQLGTTQDPGTKDRIQALLKWVSDSARVAAMKRSGRMNYMCPNSS TVEYGLLMPSPSHLHCVAAILWHSYELLVEYDLPALLDQELFELLFNWSMSLPCNMVLKK AVDSLLCSMCHVHPNYFSLLMGWMGITPPPVQCHHRLSMTDDSKKQDLSSSLTDDSKNAQ APLALTESHLATLASSSQSPEAIKQLLDSGLPSLLVRSLASFCFSHISSSESIAQSIDIS QDKLRRHHVPQQCNKMPITADLVAPILRFLTEVGNSHIMKDWLGGSEVNPLWTALLFLLC HSGSTSGSHNLGAQQTSARSASLSSAATTGLTTQQRTAIENATVAFFLQCISCHPNNQKL MAQVLCELFQTSPQRGNLPTSGNISGFIRRLFLQLMLEDEKVTMFLQSPCPLYKGRINAT SHVIQHPMYGAGHKFRTLHLPVSTTLSDVLDRVSDTPSITAKLISEQKDDKEKKNHEEKE KVKAENGFQDNYSVVVASGLKSQSKRAVSATPPRPPSRRGRTIPDKIGSTSGAEAANKII TVPVFHLFHKLLAGQPLPAEMTLAQLLTLLYDRKLPQGYRSIDLTVKLGSRVITDPSLSK TDSYKRLHPEKDHGDLLASCPEDEALTPGDECMDGILDESLLETCPIQSPLQVFAGMGGL ALIAERLPMLYPEVIQQVSAPVVTSTTQEKPKDSDQFEWVTIEQSGELVYEAPETVAAEP PPIKSAVQTMSPIPAHSLAAFGLFLRLPGYAEVLLKERKHAQCLLRLVLGVTDDGEGSHI LQSPSANVLPTLPFHVLRSLFSTTPLTTDDGVLLRRMALEIGALHLILVCLSALSHHSPR VPNSSVNQTEPQVSSSHNPTSTEEQQLYWAKGTGFGTGSTASGWDVEQALTKQRLEEEHV TCLLQVLASYINPVSSAVNGEAQSSHETRGQNSNALPSVLLELLSQSCLIPAMSSYLRND SVLDMARHVPLYRALLELLRAIASCAAMVPLLLPLSTENGEEEEEQSECQTSVGTLLAKM KTCVDTYTNRLRSKRENVKTGVKPDASDQEPEGLTLLVPDIQKTAEIVYAATTSLRQANQ EKKLGEYSKKAAMKPKPLSVLKSLEEKYVAVMKKLQFDTFEMVSEDEDGKLGFKVNYHYM SQVKNANDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTP YANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEK WNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAM LEQIRNPSPCFKEVIHKHFYLKRVEIMAQCEEWIADIQQYSSDKRVGRTMSHHAAALKRH TAQLREELLKLPCPEGLDPDTDDAPEVCRATTGAEETLMHDQVKPSSSKELPSDFQL NT seq 14574 nt NT seq  +upstreamnt  +downstreamnt atggtgactggtggtggtgctgcacctcccgggactgtcactgagccgcttcccagtgtg attgtgctgagcgcaggccggaagatggcggctgcggctgcggcggcctcgggccccggc tgctcctcggcggcgggggcgggggcggccggggtctcagagtggctggtgctgcgggac ggctgcatgcactgcgacgccgacgggctgcacagcctgtcctaccaccctgcgctcaac gccatcctggccgtcactagccgcgggaccatcaaagtcatcgacggcacctcgggggcc acactgcaggcctccgcgctcagtgctaaaccaggtggacaggtgaaatgtcagtatatc tctgctgtggataaagttatatttgtggatgattatgcagtagggtgtaggaaggacctt aatggaatcttgttgttagacactgctctgcaaactccagtttcaaagcaggatgatgtg gttcagcttgaattacccgttacagaggcacagcagctcttatcagcatgtttagaaaag gtagatatttctagtacagagggttatgatttgttcatcacacagctcaaagatggttta aaaaatacatctcatgagactgcagcaaaccacaaagttgctaagtgggccacagttaca tttcatcttcctcatcatgtgttgaagtccattgccagtgccattgtaaatgaactcaag aaaataaatcaaaatgttgctgccttacctgtggcgtcctcagtgatggacagattgtct tacctcttacctagtgcacgtccagaactcggagtggggccaggccgttctgtagacaga tcactgatgtatagtgaagctaacagacgggagacatttacctcatggcctcatgtaggc tataggtgggcacaaccagatcccatggctcaagctggattttatcatcagcctgcctca tctggagatgatagagccatgtgttttacttgtagtgtatgcctcgtttgttgggaacct actgatgaaccttggtctgaacacgaaagacattccccaaactgcccatttgtgaaaggt gagcacacacagaatgtgccattgtcagtcactcttgcaacaagtcctgcacagtttcct tgtacggatggaactgacagaatatcttgctttgggtcggggagctgccctcattttcta gctgctgcaactaaacgaggaaagatctgcatatgggatgtttccaaacttatgaaggtg cacttaaagtttgaaattaatgcctatgatccagcaattgtacaacagcttattctatca ggagacccaagctcaggagttgattcaaggagaccaactttggcgtggctggaggactcc tctagttgctcagatataccaaaattggaaggagatagtgatgatttactggaggattca gacagtgaagagcattccagatcagattctgtgacagggcatacatcacagaaggaagcc atggaagtaagccttgatataacagcactcagcattctccaacagccagaaaaacttcag tgggagattgttgcaaatgtgcttgaagatactgttaaggatcttgaagaacttggggca aatccttgtttaacaaactctaagagtgaaaagacaaaggaaaagcaccaggagcaacac aacattccttttccatgtttattagctggaggtttattaacatataaatctcctgctacc tcacccattagtagtaattctcacaggtcactggatggtttaagcagaactcagggtgaa agtatatcagaacaagggtcaactgacaatgaatcctgcactaattcagaactaaattct cctctggtaaggaggactttaccggttttgcttctttatagcatcaaggaatctgatgag aaagcaggaaagatcttttcacagatgaacaatattatgagtaaaagtttgcatgatgat ggttttactgttccacagattattgaaatggagctggatagtcaggagcagttgttattg caggatcctcctgtgacttacattcagcaatttgcagatgcagcagccaaccttacctct ccggattctgagaagtggaactctgtgtttcccaagcctgggactttggttcagtgcttg aggctgccaaagtttgcagaggaggagaatctttgtatagactcaataactccttgtgct gacggaattcatttgttggtaggactgcggacatgccctgttgaatccttgagtgcaata aatcaagtagaggccttgaataatttaaataaattaaactctgcactatgtaatagacgg aaaggtgagctggaatcaaatcttgctgtagtgaatggtgcaaatattagtgtaatccaa catgaatcaccagcagatgtacagactcctttaataattcagcctgagcagaggaatgtt agtggtggatatttagtgctttataaaatgaattatgccactcggatagtgactttagaa gaggagccaataaaaatacaacatatcaaagatccccaggacacaattacctcgctcatt ttgcttccacccgatatattggataatcgagaggatgactgtgaggaacctattgaggac atgcagttaacctcaaagaatggttttgagagagaaaaaacgtctgacatttctactctt ggacacctggtaataaccactcagggaggatatgtaaaaatactagatctttcaaacttt gaaattttggccaaagtggagcctcccaaaaaggagggcactgaggaacaggacacattt gtttctgtgatttactgttctggcacagacaggctgtgtgcatgcaccaaaggtggtgag cttcattttctccaaattggaggaacctgtgatgatattgatgaagctgatatactagtg gatggatctctttctaaaggaatagaaccatcttcagaaggttccaaacctttatcaaat ccttcaagtcctggcatttcaggagttgatttattggtggaccagccattcacccttgaa atcttgacatccctagtggagctaacccgctttgagactttgactccaaggttttcagcg actgttcctccatgctgggtagaagttcaacaagaacagcagcaaaggaggcatcctcaa catttgcatcagcaacaccatggtgatgctgctcagcatactcgaacttggaaactacag accgacagcaacagctgggatgaacatgtatttgaattagtactacctaaagcttgtatg gttggacatgtggacttcaaattcgttttgaactcaaacatcaccaatattccacagata caagtgacactgctgaaaaataaagctccaggattagggaaagtcaatgctcttaacatt gaagtggaacaaaatgggaaaccgtccctggttgatttgaatgaagaaatgcagcacatg gatgtagaggaatcacagtgtcttagattatgtccatttttggaggatcataaagaagac attctatgtgggccagtatggcttgctagtggccttgatctatcagggcatgctggaatg ttgacgttaacaagccccaaacttgttaaaggtatggcaggaggaaaatatcgttcgttt ttaatccatgtcaaggcagtgaatgaaagaggaacagaagagatttgtaatggtggtatg cgtcctgtagtaaggcttccatccctaaaacaccagagtaacaagggttattcacttgct tcacttttggctaaagttgcagcaggcaaggaaaaatcatctaatgttaagaatgaaaat acaagtggcacccgtaaatctgaaaacctccggggctgtgatttacttcaagaggtctca gtcaccattcgaagatttaagaaaacctcaatttctaaggaaagagtgcaacgatgtgcc atgttacagttttcagaatttcatgagaagcttcttaatactctttgcagaaaaacagat gatggccagatcacagaacatgcccagagccttgtgttggatactctctgttggttagct ggagttcattcaaatggacccggaagctcaaaggaaggaaatgagaacctactttcaaaa acacgaaaatttctgtcagacatcgtacgtgtttgcttctttgaggcaggacgaagtata gcccataagtgtgcccgatttctagccttgtgcattagtaatggcaaatgtgacccatgt caaccagcatttggacctgttctgttgaaggctttacttgataatatgtcatttttacct gcagcaacaactggtggttctgtctattggtattttgtcttactgaattatgtgaaagat gaagatctggctggatgcagtacagcttgtgcatctttgcttactgcagtgtccagacag ttacaggacaggctaacaccaatggaggctttacttcagacaagatatggattatatagc tcaccatttgatccagtcctctttgatttggagatgagtggctcttcttgtaaaaatgtt tataacagcagcattggtgtccagtcagatgaaattgatttatcagatgtcctttcagga aatggaaaggtcagtagttgcacagctgctgagggtagtttcacatctctcactggactt ttggaagttgaacctctgcactttacttgtgtgtcaactagtgatggaaccagaatagaa agggatgatgcaatgagttccttcggggttactcctgcagtaggtggactatcatctggg acagttggggaagcctcgacagccctgagttcagcagcccaggtagctttgcagtctctc tctcatgcaatggcttcagccgagcaacagctacaggtgctgcaagagaaacagcagcag cttttgaagcttcagcaacagaaagcaaagctggaagccaagttacatcagacaacagct gcagcagctgcagcagcatcagcagtaggtcctgttcacaactctgtgccttccaaccca gtggctgcccctggattcttcattcatccatctgatgttattccacccactccaaaaaca acacctctttttatgactccaccactcactccacccaatgaagcagtttccgttgtgatt aatgccgaacttgcacagcttttcccaggctcagtcattgatcccccagcagtcaatctt gctgcacataacaaaaattccaacaagtccagaatgaatccacttggttctggtctagcc cttgcaatttctcatgcttcacattttcttcaacctccgcctcaccagtccattattata gagcgaatgcattcaggagcaagaagatttgtgaccttggattttgggaggcctatattg ttgactgatgtattgattcccacttgtggagacttggcctctttgtcaattgacatttgg acattaggagaagaggtggatggaaggcggttggtagtggcaactgatataagcactcat tcactaattcttcatgacttaataccacctcccgtgtgcagattcatgaagatcactgtt attggacgttacgggagtacaaatgccagagccaaaatcccattaggattttactatggt catacctacatcttgccttgggaaagtgaactgaagttaatgcatgatcctctaaaggga gagggagaatctgcaaaccagccagaaattgaccagcatttagcaatgatggttgctttg caggaggatatacagtgcaggtataacttggcttgtcatcgtctggaaacccttttgcaa agtattgatcttcctcctctaaacagtgctaacaatgcacagtactttttacgaaaacca gataaggcagttgaggaagacagtagggttttttctgcttatcaagattgtattcagcta cagcttcaactaaatttggctcataatgcagtgcagaggctcaaagtggcgctaggtgca agccggaagatgttgagtgaaacatcaaatccagaagatttaattcagacatcttccaca gagcagttacgtactatcatcagatatttactggacactttgctcagcctgcttcatgct tctaatggacactctgttcctgcagttttgcagagcacatttcatgcccaggcctgtgaa gagctctttaaacacttgtgcatcagtggaaccccaaagatacggttacatactggtctt cttcttgttcaactgtgtggtggtgaaaggtggtggggtcaatttctttctaatgtcctt caggaattgtacaattcggaacagcttctcatctttccacaggatagggtcttcatgtta ctttcctgcattggtcaaagatcacttagtaatagtggagtattagaaagcttacttaat ctcttggataatttattgtcacctcttcagccacagttacccatgcataggaggacagaa ggagtactagatattcccatgatcagttgggttgttatgctggtgtccaggttgctggat tatgtggcaactgttgaagatgaagcagcagctgcaaagaaacctttgaatggtaatcag tggagttttattaacaataatctacacactcagagcttaaatagatcttctaaaggcagc agtagccttgatagattatattccagaaaaatcagaaagcagcttgttcatcataaacag caacttaacctactaaaagcaaagcagaaggcattggtagaacagatggaaaaagaaaaa atacaaagtaacaaaggatcatcatataaactcctggtagaacaagcaaaactaaagcag gccacttcaaagcactttaaggatttaattcgtttacgtcggacagcagaatggtcccgt tctaatttagacacagaagttacaacagcaaaagaaagtcctgagatagaaccacttcca tttactctggcccatgagcgttgtatctcagtagtccagaaacttgttctgtttcttctc tccatggactttacatgtcatgcagatctcttattgtttgtttgtaaggttcttgcacgc attgcaaatgccacgaggccaactattcatctgtgtgagattgtgaacgaaccccagctg gaaagactgctgttacttttggttggaactgacttcaatagaggagatatatcttggggt ggtgcttgggctcagtattccttaacttgcatgctacaagatattttagcaggagaatta ctggctccagtagccgcagaagccatggaggaaggaacagtgggtgatgatgtaggtgcg acagctggtgactctgatgactcccttcaacagtcctcagttcagttgctggaaactata gatgaacctttgacacatgacataacaggtgcacctcctctgtcctctttggaaaaagat aaagaaattgaccttgagttacttcaggatctaatggaagttgacattgatcctttagat attgatttggaaaaggaccctcttgcagccaaggtttttaagccaataagcagtacatgg tatgattattggggtgctgattatgggacctacaattacaacccttacattggaggtctg ggaattcctgtagcaaagccaccagcaaacacggagaagaacggatcacagacagttagc gtttcagtctctcaggccctggatgctcgcctagaagttggacttgaacagcaagcagaa ctgatgttgaaaatgatgtctactctggaggcagattccattttacaggcattaacaaat acatctcctacattatcacagtctcccactggaacagatgattcacttctagggggttta caagcagcaaaccaaaccagccagcttattatacagttatcatctgtcccaatgttaaat gtttgtttcaacaaacttttttccatgcttcaagtccatcatgttcagttggagtcactt ctccaattgtggctcacactgagcctgaattctagttcaactggaaacaaagaaaatgga gcagacatatttttatataatgctaataggatacctgttatttcattaaatcaagcatca ataactagctttctcacagtgttagcttggtatcccaatactttgctccggacatggtgc cttgtgcttcatagcctaacactcatgacaaacatgcagcttaattctggttccagcagt gccattggaactcaggagagtactgctcatttgttggtttcagatccaaacctaattcat gtattagtgaaatttctttctggcaccagtccacatggaacaaatcaacacagtccacag gttggtcctacagctacacaagctatgcaagaatttcttactcgattacaagtgcatctt tcttcaacatgtcctcagatattcagtgaatttttgctcaagctaattcatatactttca actgaaaggggtgctttccagacaggccaaggacctctcgatgcccaagtgaagctctta gaattcactctggagcagaattttgaagtcgtttcagttagtactatttctgccgtgata gaatcggttacatttttagtgcaccactatatcacttgctcagacaaagtaatgtcaaga agtggatcagatagctccgtgggtgctcgagcatgctttgggggactctttgccaatctt attcgtccgggtgatgcaaaagcagtttgtggcgaaatgacaagagatcaactcatgttt gatttgttaaaacttgttaacattttagtgcagctgcctctttcaggcaatagggaatac agtgcaagagtgtctgtgaccacaaatacaacagatagtgtttcagatgaagaaaaagtc tcaggaggcaaagatggcaatggaagcagtaccagtgttcaaggatcgcctgcatatgtt gctgacttagtcttagccaaccaacaaattatgagccagattttgtctgctctgggcctg tgtaatagcagtgccatggcaatgataattggagcaagtggattacatctcactaaacat gaaaactttcatggtgggttggatgccatatcagttggggatggattatttaccatactg acaacccttagtaaaaaagcttctacagtccacatgatgctgcagccaattttaacatac atggcctgtggatatatgggcagacaaggctctcttgctacttgccagttatctgagcca ttattgtggttcattttgagagtattggatactagtgatgccttgaaagcatttcatgat atgggtggtgttcagctcatatgcaataatatggttactagtacaagggctattgtgaac actgcaagaagtatggtatcaactattatgaaatttcttgactctggtccaaataaagct gttgacagcacattgaaaacaagaatactagcttctgagcctgacaatgctgaagggatt cataactttgcacccctcggtacaatcacatctagcagtcctactgcccaaccagctgaa gtgctattgcaggccacacctcctcacagaagagctcgctctgctgcttggtcctacatc tttcttccagaggaggcttggtgtgaccttaccattcaccttcctgcagcagtgctgctt aaggagatacatatccagcctcatcttgcatctcttgcaacctgcccttcctcagtgtct gttgaagtaagtgcagatggggtaaatatgctacctttgtccactcctgttgtcacaagt ggcctcacctacataaaaattcagcttgtaaaagccgaagtagcttctgctgtctgcctt agactacatcgtccacgggatgccagcacattaggcctttcacaaattaaattattgggg ctcactgcttttggtaccacctcttctgcaacagttaataatccattccttccatctgaa gatcaggtatccaaaacaagtattggatggttacggttattacatcattgccttactcac ataagtgatctagaaggaatgatggcaagtgcagctgcacctactgctaatctgctgcag acttgtgcggccttattgatgtcaccttactgtggaatgcattcacccaacatcgaggtt gtgcttgtaaagataggactgcagtctactagaattggcctgaagctcatagacattctc ctgagaaattgtgcagcatcaggcagtgatcctacagatttgaatagtcctttacttttt ggaagactaaatggactctcttctgactctacgatagatattctttaccagcttggaaca actcaggatcctggtacaaaagacagaattcaggccttgttaaaatgggttagtgattct gcaagagtggctgctatgaagagaagtggcaggatgaactacatgtgtcctaactcctca acagtagagtatggtcttctgatgccatctccttctcatttgcactgtgtagcagccatt ctgtggcatagttatgagctgcttgtagaatatgacttaccagcactcctggaccaagag ctctttgagttactttttaattggtccatgtctcttccctgcaatatggttttgaagaaa gctgttgacagtctactttgctcaatgtgtcacgtacacccaaactatttttctttgctc atgggctggatgggaattacccctcctccagtgcaatgtcatcatagactgtccatgaca gatgatagcaaaaagcaggatcttagttcatctttaacagatgactctaaaaatgcacaa gcacctctcgcattaactgaatcacatttggctacccttgcttcctcttctcaatctcct gaagctattaaacaattactagactcaggtttgccttctcttcttgtgaggagtctggct agtttctgctttagccacatttctagctcagaaagcattgcccagtcaatagatatttcc caggacaaactcaggcgccatcatgtcccacaacaatgtaataagatgcctatcacagcc gacctagttgctcctattcttaggtttttgacagaagttggcaatagccatattatgaaa gattggcttggtggttctgaagtcaatccactatggacagcacttctgtttttattgtgt cactctgggtccacttctggaagccataatttaggtgcacaacagaccagtgcaagatca gcttctctttcttcagctgctacaacaggactgactactcaacagcgcacagcaattgag aatgcaactgttgcgttctttctacagtgcatttcatgccatcctaataatcaaaagctg atggcacaggttctttgtgaactatttcagacatctcctcaaagagggaaccttccaaca tctgggaacatttcagggtttatacgaagattatttttacagttgatgctggaagatgag aaagtgacaatgtttcttcagtctccatgtccactgtacaaaggtagaattaatgctact agccacgtcatccagcatccaatgtatggagcaggccacaaattccgtactcttcatttg ccagtctcaacaacattatcagatgttcttgacagagtgtcagatactccaagtatcaca gctaaattaattagtgaacaaaaagatgacaaagaaaagaaaaaccatgaagagaaagaa aaagttaaagcggaaaatggatttcaagacaattacagtgttgttgttgcctctgggctg aagtctcaatctaaacgtgctgtgtcagctacaccacctcgcccaccatccaggaggggg aggacaatacctgataaaataggaagtacttcaggagcagaggctgccaacaaaataatt actgtcccagtgtttcacctgtttcacaaactcttggcaggccagccattgccagctgaa atgacacttgcccagcttttaactctcctatatgaccgaaaacttcctcagggttaccgc tcaatagatctgactgttaaattgggatcaagagttataacagaccccagtctatcaaaa acagattcttataaaagactacaccctgaaaaagatcatggagacttacttgctagctgt ccagaagatgaggctctcactccaggtgatgaatgcatggatgggatactggatgaatct ttgcttgaaacctgtccaattcagtcaccattacaagtttttgcaggaatgggtggactg gctcttattgctgaaagactacccatgctatatccagaagtaattcaacaggtgagtgct ccagttgtaacatctaccactcaggaaaagccgaaggatagcgatcagtttgaatgggtg accattgaacagtcaggggagttagtttatgaagcaccagaaactgttgcggctgaacct ccacctatcaagtcagcagtacagaccatgtctcccatacctgcccattctttggctgct tttggattatttcttcgtcttccgggctatgcggaagtgctactgaaagagagaaaacat gcccagtgccttcttcgattggtattgggagtgacagatgatggagaaggaagtcatatt cttcaatctccatcagccaatgtgcttccaacccttcctttccacgtccttcgtagcttg tttagcactacacctttgacaactgatgatggtgtacttctaaggcggatggcattggaa attggagccttacacctcattcttgtctgtctctctgctttgagccaccattccccacga gttccaaactctagcgtgaatcaaactgagccacaggtgtcaagctctcataaccctaca tcaacagaagaacaacagttatattgggccaaagggactggctttggaacaggctctaca gcttctgggtgggatgtggaacaagccttaactaagcaaaggctggaagaggaacatgtt acctgccttctgcaggttcttgccagttacataaatcccgtcagtagtgcggtaaatgga gaagctcagtcatctcatgagactagagggcagaacagtaatgcccttccttctgtactt ctcgagcttctcagtcagtcctgcctcatcccagccatgtcatcttatctacgaaatgat tcagttctggacatggcaagacatgtgccactctatcgggcactgctggaattgcttcgg gccattgcttcttgtgctgccatggtgcccctattgttgcccctttctacagagaacggt gaagaggaagaagaacagtcagaatgtcaaacttctgttggtacattgttagccaaaatg aagacctgtgttgatacctataccaaccgtttaagatctaaaagggaaaatgttaaaaca ggagtaaaaccagatgcgtctgatcaagaaccagaaggacttactcttttggtaccagac atccaaaagactgctgagatagtttatgcagccaccaccagtttgcggcaagcaaatcag gaaaaaaaactgggtgaatactccaagaaggcggctatgaaacccaaacctttgtcagta ttaaagtcacttgaagaaaaatatgtggctgttatgaagaaattacagtttgatacgttt gaaatggtttctgaagatgaagatgggaaattgggatttaaagtaaattaccactacatg tctcaggtgaaaaatgctaatgatgcgaacagtgctgccagagctcgccgccttgcccag gaagctgtgacgctttcaacctcactgcctctgtcttcatcctctagtgtgtttgtacgc tgtgatgaggagcgacttgatatcatgaaggttctaataactggtccagcggacacccct tatgcaaatggctgctttgagtttgatgtgtattttcctcaagattatcccagttcaccc cctcttgtgaatctagagacaactggtggtcatagcgtgcgattcaatccaaacctttat aatgatggcaaggtttgtttaagcatcttaaacacgtggcatggaagaccagaagagaag tggaatcctcagacctcaagctttttgcaagtgttggtgtctgtccagtcccttatatta gtagctgagccttattttaatgaaccgggatatgaacggtctagaggcactcccagtggc acacagagttctcgagaatatgatggaaacattcgacaagcaacagttaagtgggcaatg ctagaacaaatcagaaacccttcaccatgttttaaagaggtaatacacaaacatttttac ttgaaaagagttgagataatggcccaatgtgaggagtggattgcggatatccagcagtac agcagtgataagcgggtaggcaggactatgtctcaccatgcagcagctctcaagcgtcac actgctcagctccgcgaagagttgctgaaacttccctgccctgaaggcttggatcctgac actgacgatgccccagaggtgtgcagagccacaacaggtgctgaggagactctaatgcat gatcaggttaaacccagcagcagcaaagaactccccagtgacttccagttatga

Homo sapiens (human): 55823 Help Entry 55823             CDS       T01001                                  Symbol VPS11, END1, HLD12, DYT32, PEP5, RNF108, hVPS11 Name (RefSeq) VPS11 core subunit of CORVET and HOPS complexes   KO K20179   vacuolar protein sorting-associated protein 11 Organism hsa  Homo sapiens (human) Pathway hsa04140   Autophagy - animal hsa04148   Efferocytosis hsa05132   Salmonella infection Network nt06181  Salmonella nt06532  Autophagy   Element N01300   Tethering of late endosomes and lysosomes N01301   Salmonella SifA to Tethering of late endosomes and lysosomes N01721   Autophagosome and lysosome fusion, tethering factor Disease H00679   Hypomyelinating leukodystrophy H00831   Primary dystonia Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     55823 (VPS11)    04148 Efferocytosis     55823 (VPS11)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     55823 (VPS11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     55823 (VPS11) Membrane trafficking [BR:hsa04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     55823 (VPS11)    Hops complex     55823 (VPS11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VPS11_C Clathrin zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3H2C3 zf-RING_UBOX zf-RING_5 TPR_11 DLP_helical zf-RING_11 zf-C3HC4_3 zf-RING-like zf-ANAPC11 DUF5847 Motif Other DBs NCBI-GeneID:  55823 NCBI-ProteinID:  NP_068375 OMIM:  608549 HGNC:  14583 Ensembl:  ENSG00000160695 UniProt:  Q9H270 A0A087WXL6 B7Z879 LinkDB All DBs Position 11:119067818..119081972 Genome browser AA seq 941 aa AA seqDB search MAAYLQWRRFVFFDKELVKEPLSNDGAAPGATPASGSAASKFLCLPPGITVCDSGRGSLV FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLIIVSRDRKVSPKSEFTS RDSQSSDKQILNIYDLCNKFIAYSTVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKKKSES EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGRSDREAPGCRANSEEFIPIFANN PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAISLLKSGRFC DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVISVCERHGEQDPSLW EQALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD YFGRGVFNKLTLLTDPPTARLTSSLEAGLQRDLLMHSRRGT NT seq 2826 nt NT seq  +upstreamnt  +downstreamnt atggcggcctacctgcagtggcggcgcttcgttttcttcgacaaggagctggtgaaggag ccgctgagcaatgatggggccgctcccggggccacacctgcttctggatccgctgcttcc aagttcctttgcctccctcctggcatcactgtctgcgactcaggccgagggagcctggtc tttggagatatggaaggccagatctggttcttgccacgttccctacagcttacaggcttc caagcctacaaactacgggtgacacacctgtaccaactgaagcagcacaatattctggca tctgttggagaagatgaagagggcatcaaccccttggttaagatctggaacctggagaag agagatggtggcaatccactctgcactcgaatcttccctgctattccaggaacagagcca actgttgtatcttgtttgactgtccatgaaaatctcaactttatggccattggtttcaca gatggcagtgttacattgaacaaaggagacatcacccgggaccggcatagcaagacccag attttgcacaagggcaactatcctgtaactggattggcctttcgccaagcaggaaagacc actcacttgtttgttgtgacaacagagaacgtccagtcctatatagtttctggaaaagac taccctcgcgtggagttggacacccatggttgtggcctgcgctgctcagccctaagtgac ccttctcaggacctgcagttcattgtggccggggatgagtgtgtctacttgtaccagcct gatgaacgtgggccctgcttcgcctttgagggccataagctcattgcccactggtttaga ggctaccttatcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc agggattcacagagctccgacaagcagattctaaacatctatgacctgtgcaacaagttc atagcctatagcaccgtctttgaggatgtagtggatgtgcttgctgagtggggctccctg tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa ctggagatgctgtttaagaagaacctatttgagatggcgattaaccttgccaagagccag catctggacagtgatgggctggcccagattttcatgcagtatggagaccatctctacagc aagggcaaccacgatggggctgtccagcaatatatccgaaccattggaaagttggagcca tcctacgtgatccgcaagtttctggatgcccagcgcattcacaacctgactgcctacctg cagaccctgcaccgacaatccctggccaatgccgaccataccaccctgctcctcaactgc tataccaagctcaaggacagctcgaagctggaggagttcatcaagaaaaagagtgagagt gaagtccactttgatgtggagacagccatcaaggtcctccggcaggctggctactactcc catgccctgtatctggcggagaaccatgcacatcatgagtggtacctgaagatccagcta gaagacattaagaattatcaggaagcccttcgatacatcggcaagctgccttttgagcag gcagagagcaacatgaagcgctacggcaagatcctcatgcaccacataccagagcagaca actcagttgctgaagggactttgtactgattatcggcccagcctcgaaggccgcagcgat agggaggccccaggctgcagggccaactctgaggagttcatccccatctttgccaataac ccgcgagagctgaaagccttcctagagcacatgagtgaagtgcagccagactcaccccag gggatctacgacacactccttgagctgcgactgcagaactgggcccacgagaaggatcca caggtcaaagagaagcttcacgcagaggccatttccctgctgaagagtggtcgcttctgc gacgtctttgacaaggccctggtcctgtgccagatgcacgacttccaggatggtgtcctt tacctttatgagcaggggaagctgttccagcagatcatgcactaccacatgcagcacgag cagtaccggcaggtcatcagcgtgtgtgagcgccatggggagcaggacccctccttgtgg gagcaggccctcagctacttcgctcgcaaggaggaggactgcaaggagtatgtggcagct gtcctcaagcatatcgagaacaagaacctcatgccacctcttctagtggtgcagaccctg gcccacaactccacagccacactctccgtcatcagggactacctggtccaaaaactacag aaacagagccagcagattgcacaggatgagctgcgggtgcggcggtaccgagaggagacc acccgtatccgccaggagatccaagagctcaaggccagtcctaagattttccaaaagacc aagtgcagcatctgtaacagtgccttggagttgccctcagtccacttcctgtgtggccac tccttccaccaacactgctttgagagttactcggaaagtgatgctgactgccccacctgc ctccctgaaaaccggaaggtcatggatatgatccgggcccaggaacagaaacgagatctc catgatcaattccagcatcagctcaagtgctccaatgacagcttttctgtgattgctgac tactttggcagaggtgttttcaacaaattgactctgctgaccgaccctcccacagccaga ctgacctccagcctggaggctgggctgcaacgcgacctactcatgcactccaggaggggc acttaa

Homo sapiens (human): 64601 Help Entry 64601             CDS       T01001                                  Symbol VPS16, DYT30, hVPS16 Name (RefSeq) VPS16 core subunit of CORVET and HOPS complexes   KO K20180   vacuolar protein sorting-associated protein 16 Organism hsa  Homo sapiens (human) Pathway hsa04140   Autophagy - animal hsa04148   Efferocytosis hsa05132   Salmonella infection Network nt06181  Salmonella nt06532  Autophagy   Element N01300   Tethering of late endosomes and lysosomes N01301   Salmonella SifA to Tethering of late endosomes and lysosomes N01721   Autophagosome and lysosome fusion, tethering factor Disease H00831   Primary dystonia Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     64601 (VPS16)    04148 Efferocytosis     64601 (VPS16)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     64601 (VPS16)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     64601 (VPS16) Membrane trafficking [BR:hsa04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     64601 (VPS16)    Hops complex     64601 (VPS16) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps16_N Vps16_C Motif Other DBs NCBI-GeneID:  64601 NCBI-ProteinID:  NP_072097 OMIM:  608550 HGNC:  14584 Ensembl:  ENSG00000215305 UniProt:  Q9H269 Structure PDB LinkDB All DBs Position 20:2840745..2866732 Genome browser AA seq 839 aa AA seqDB search MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW TVLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKES QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVH MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK NT seq 2520 nt NT seq  +upstreamnt  +downstreamnt atggactgctacacggcgaactggaacccactcggggactctgccttttaccggaaatat gagctgtacagcatggactgggacctgaaggaggaactcagggattgcctggtggctgct gcaccctatgggggccccattgcactgctgaggaacccctggcggaaggagaaagctgct agtgtgaggccagtgctcgatatatactctgcttccggcatgcctctggccagcctgctg tggaagagtggacccgtggtgtccctgggctggtcagctgaggaggagctgctctgtgtg caggaagatggtgctgtactggtttatgggcttcatggtgacttccggagacacttcagc atgggcaatgaagtgctccagaaccgggttctggatgcccggatctttcacactgagttt ggttccggagtggccatcctcacaggggcccaccgcttcaccctcagtgccaatgtgggt gacctcaaactccgccggatgccagaggtgccaggtctgcaaagtgcaccctcctgctgg actgtgctgtgccaggaccgagtggcacacattcttctggctgtggggcctgacctttac ctcttggaccatgcagcctgctccgcagtgacgccccctggcctggccccaggagtaagc agcttcctacagatggctgtctccttcacctaccgacacctggcactcttcacagacaca ggctacatctggatggggacagcatcactcaaggagaagctatgtgagttcaactgcaac atccgggcacctccaaagcagatggtctggtgcagccgtcctcgtagcaaggagagggcc gtggtggtggcctgggaaaggcggctgatggtggtgggcgatgcacccgagagcatccag tttgtgctggatgaggactcctacctggtgcctgagctcgatggggtccgcatcttctcc cgcagcacccacgagttcctgcatgaggttccagcggccagcgaggaaatcttcaaaatt gcctcaatggcccccggggcgctgctcctggaggctcagaaggagtatgagaaagagagc cagaaggcggacgagtacctgcgggagatccaggagctgggccagctgacccaggccgtg cagcagtgcattgaggctgcaggacatgagcaccagccagacatgcagaagagtctgctc agggccgcctccttcggaaagtgtttcctggacagatttccacccgacagcttcgtgcac atgtgtcaggacctgcgtgtgctcaatgctgttcgggactatcacatcgggatcccgctc acctatagccaatataagcagctcaccatccaggtgctgctggacaggctcgtgttgcgg agactttaccccctggccatccagatatgcgagtacttgcgccttcctgaagtacagggc gtcagcaggatcctggcccactgggcctgctacaaggtgcaacagaaggatgtctcagat gaggatgtggctcgagccattaaccagaagctgggggacacgcctggtgtctcttactcc gacattgctgcacgagcctatggttgtggccgcacggagctggccatcaagctgctggag tatgagccacgctcaggggagcaggtaccccttctcctaaagatgaagaggagcaaactg gcactaagcaaggccatcgagagcggggacactgacctggtgttcacggtgttgctgcac ctgaagaacgagctgaaccgaggagattttttcatgacccttcggaatcagcccatggcc ctcagtttgtaccgacagttctgtaagcatcaggagctagagacgctgaaggacctttac aatcaggatgacaatcaccaggaattgggcagcttccacatccgagccagctatgctgca gaagagcgtattgaggggcgagtagcagctctgcagacagccgccgatgccttctacaag gccaagaatgagtttgcagccaaggctacagaggatcaaatgcggctcctacggctgcag cggcgcctagaagacgagctggggggccagttcctagacctgtctctacatgacacagtt accaccctcattcttggcggtcacaacaagcgtgcagagcagctggcacgtgacttccgc atccctgacaagaggctctggtggctgaagctgactgccctggcagatttggaagattgg gaagagctagagaagttttccaagagcaagaaatcacccattggctacctgccttttgtg gagatctgcatgaaacaacataacaaatacgaagccaagaagtatgcttcccgcgtgggt cccgagcagaaggtcaaggctttgcttcttgttggcgatgtggctcaggctgcagatgtg gccatcgaacaccggaatgaggctgagctgagcctcgtattgtcccactgcacgggagcc acagatggggccacagctgacaagattcaacgggccagggcacaagcccagaagaagtga

Homo sapiens (human): 57617 Help Entry 57617             CDS       T01001                                  Symbol VPS18, PEP3 Name (RefSeq) VPS18 core subunit of CORVET and HOPS complexes   KO K20181   vacuolar protein sorting-associated protein 18 Organism hsa  Homo sapiens (human) Pathway hsa04140   Autophagy - animal hsa04148   Efferocytosis hsa05132   Salmonella infection Network nt06181  Salmonella nt06532  Autophagy   Element N01300   Tethering of late endosomes and lysosomes N01301   Salmonella SifA to Tethering of late endosomes and lysosomes N01721   Autophagosome and lysosome fusion, tethering factor Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     57617 (VPS18)    04148 Efferocytosis     57617 (VPS18)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     57617 (VPS18)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     57617 (VPS18) Membrane trafficking [BR:hsa04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     57617 (VPS18)    Hops complex     57617 (VPS18) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf-RING_5 Vps39_2 zf-C3HC4_2 zf-RING_16 KNOX2 zf-RING_2 zf-ANAPC11 zf-RING_UBOX zf-rbx1 CNH zf-C3HC4 Motif Other DBs NCBI-GeneID:  57617 NCBI-ProteinID:  NP_065908 OMIM:  608551 HGNC:  15972 Ensembl:  ENSG00000104142 UniProt:  Q9P253 LinkDB All DBs Position 15:40894450..40903975 Genome browser AA seq 973 aa AA seqDB search MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI DPQRYEEEQLSWL NT seq 2922 nt NT seq  +upstreamnt  +downstreamnt atggcgtccatcctggatgagtacgagaactcgctgtcccgctcggccgtcttgcagccc ggctgccctagcgtgggcatcccccactcggggtatgtgaatgcccagctggagaaggaa gtgcccatcttcacaaagcagcgcattgacttcaccccttccgagcgcattaccagtctt gtcgtctccagcaatcagctgtgcatgagcctgggcaaggatacactgctccgcattgac ttgggcaaggcaaatgagcccaaccacgtggagctgggacgtaaggatgacgcaaaagtt cacaagatgttccttgaccatactggctctcacctgctgattgccctgagcagcacggag gtcctctacgtgaaccgaaatggacagaaggtacggccactagcacgctggaaggggcag ctggtggagagtgtgggttggaacaaggcactgggcacggagagcagcacaggccccatc ctggtcgggactgcccaaggccacatctttgaagcagagctctcagccagcgaaggtggg cttttcggccctgctccggatctctacttccgcccattgtacgtgctaaatgaagaaggg ggtccagcacctgtgtgctcccttgaggccgagcggggccctgatgggcgtagctttgtt attgccaccactcggcagcgcctcttccagttcataggccgagcagcagagggggctgag gcccagggtttctcagggctctttgcagcttacacggaccacccacccccattccgtgag tttcccagcaacctgggctacagtgagttggccttctacacccccaagctgcgctccgca ccccgggccttcgcctggatgatgggggatggtgtgttgtatggggcattggactgtggg cgccctgactctctgctgagcgaggagcgagtctgggagtacccagagggggtagggcct ggggccagcccacccctagccatcgtcttgacccagttccacttcctgctgctactggca gaccgggtggaggcagtgtgcacactgaccgggcaggtggtgctgcgggatcacttcctg gagaaatttgggccgctgaagcacatggtgaaggactcctccacaggccagctgtgggcc tacactgagcgggctgtcttccgctaccacgtgcaacgggaggcccgagatgtctggcgc acctatctggacatgaaccgcttcgatctggccaaagagtattgtcgagagcggcccgac tgcctggacacggtcctggcccgggaggccgatttctgctttcgccagcgtcgctacctg gagagcgcacgctgctatgccctgacccagagctactttgaggagattgccctcaagttc ctggaggcccgacaggaggaggctctggctgagttcctgcagcgaaaactggccagtttg aagccagccgaacgtacccaggccacactgctgaccacctggctgacagagctctacctg agccggcttggggctctgcagggcgacccagaggccctgactctctaccgagaaaccaag gaatgctttcgaaccttcctcagcagcccccgccacaaagagtggctctttgccagccgg gcctctatccatgagctgctcgccagtcatggggacacagaacacatggtgtactttgca gtgatcatgcaggactatgagcgggtggtggcttaccactgtcagcacgaggcctacgag gaggccctggccgtgctcgcccgccaccgtgacccccagctcttctacaagttctcaccc atcctcatccgtcacatcccccgccagcttgtagatgcctggattgagatgggcagccgg ctggatgctcgtcagctcattcctgccctggtgaactacagccagggtggtgaggtccag caggtgagccaggccatccgctacatggagttctgcgtgaacgtgctgggggagactgag caggccatccacaactacctgctgtcactgtatgcccgtggccggccggactcactactg gcctatctggagcaggctggggccagcccccaccgggtgcattacgacctcaagtatgcg ctgcggctctgcgccgagcatggccaccaccgcgcttgtgtccatgtctacaaggtccta gagctgtatgaggaggccgtggacctggccctgcaggtggatgtggacctggccaagcag tgtgcagacctgcctgaggaggatgaggaattgcgcaagaagctgtggctgaagatcgca cggcacgtggtgcaggaagaggaagatgtacagacagccatggcttgcctggctagctgc cccttgctcaagattgaggatgtgctgcccttctttcctgatttcgtcaccatcgaccac ttcaaggaggcgatctgcagctcacttaaggcctacaaccaccacatccaggagctgcag cgggagatggaagaggctacagccagtgcccagcgcatccggcgagacctgcaggagctg cggggccgctacggcactgtggagccccaggacaaatgtgccacctgcgacttccccctg ctcaaccgccctttttacctcttcctctgtggccatatgttccatgctgactgcctgctg caggctgtgcgacctggcctgccagcctacaagcaggcccggctggaggagctgcagagg aagctgggggctgctccacccccagccaagggctctgcccgggccaaggaggccgagggt ggggctgccacggcagggcccagccgggaacagctcaaggctgacctggatgagttggtg gccgctgagtgtgtgtactgtggggagctgatgatccgctctatcgaccggccgttcatc gacccccagcgctacgaggaggagcagctcagttggctgtag

Homo sapiens (human): 65082 Help Entry 65082             CDS       T01001                                  Symbol VPS33A, MPSPS Name (RefSeq) VPS33A core subunit of CORVET and HOPS complexes   KO K20182   vacuolar protein sorting-associated protein 33A Organism hsa  Homo sapiens (human) Pathway hsa04140   Autophagy - animal hsa04148   Efferocytosis hsa05132   Salmonella infection Network nt06181  Salmonella nt06532  Autophagy   Element N01300   Tethering of late endosomes and lysosomes N01301   Salmonella SifA to Tethering of late endosomes and lysosomes N01721   Autophagosome and lysosome fusion, tethering factor Disease H02205   Mucopolysaccharidosis-plus syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     65082 (VPS33A)    04148 Efferocytosis     65082 (VPS33A)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     65082 (VPS33A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     65082 (VPS33A) Membrane trafficking [BR:hsa04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     65082 (VPS33A)    Hops complex     65082 (VPS33A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sec1 Pectinesterase DTP-pb9_A-dom_C Motif Other DBs NCBI-GeneID:  65082 NCBI-ProteinID:  NP_075067 OMIM:  610034 HGNC:  18179 Ensembl:  ENSG00000139719 UniProt:  Q96AX1 Structure PDB LinkDB All DBs Position 12:complement(122229564..122266494) Genome browser AA seq 596 aa AA seqDB search MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV EKMFTLKGNRLPAADVKNIIFFVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLL CEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLM TLQALYGTIPQIFGKGECARQVANMMIRMKREFTGSQNSIFPVFDNLLLLDRNVDLLTPL ATQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAEELYAEIR DKNFNAVGSVLSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAEL IKDVTTSEDFFDKLTVEQEFMSGIDTDKVNNYIEDCIAQKHSLIKVLRLVCLQSVCNSGL KQKVLDYYKREILQTYGYEHILTLHNLEKAGLLKPQTGGRNNYPTIRKTLRLWMDDVNEQ NPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPTGLQKKRQPG ENRVTLIFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLMNGTSWIEALMEKPF NT seq 1791 nt NT seq  +upstreamnt  +downstreamnt atggcggctcatctgtcctacggccgagtgaacctaaacgtgttgcgcgaggcggtgcgt cgcgagctgcgcgagttcctggacaagtgcgcaggaagcaaggcaatagtttgggatgaa tacctaactggaccctttggcctgattgcacagtattcactattgaaggaacatgaagtg gaaaaaatgttcacacttaaaggaaatcgtttgccggcagctgatgtgaagaatataatt ttttttgtcagacccaggctagagttgatggatataatcgctgaaaacgtgctcagtgaa gatagacgaggcccaacgagagattttcatattctgtttgtgccacgccgtagcctgttg tgcgaacagcggttgaaggatctgggtgtcttgggatcctttattcacagggaggagtac agcttagatctcattccattcgatggggatctcttatccatggaatcagagggtgcattc aaagagtgctacctggagggtgaccagacgagcctgtaccacgcagccaaggggctgatg accctgcaagctctgtatggaacgatcccccagatctttgggaaaggagaatgcgctcgg caagtggccaatatgatgatcaggatgaagagagagtttacaggaagccagaattcaata tttcctgtttttgataatctcttgttgcttgatcggaatgtggatttattaacacctctt gccactcagctgacatatgaaggactcattgatgaaatttatggcattcagaacagttat gtgaaattacctccagagaaatttgcacctaagaaacagggcgatggtggtaaggacctc cccacggaagcaaagaagctgcagctgaattctgcagaggagctctatgctgagatccga gataagaacttcaacgcagttggctctgtgctcagcaagaaagcaaagatcatctctgca gcattcgaggaaagacacaatgctaagaccgtgggggagatcaagcagtttgtttcccag ttgccccacatgcaggcagcaaggggctcgcttgcaaaccatacctcaattgcagaattg atcaaagatgtcactacttctgaagacttttttgataaattaaccgtggaacaggagttt atgtctggaatagacactgataaggtcaacaattacattgaggattgtatcgcccaaaag cactcgttgatcaaggtgttaagactagtttgcctccaatccgtgtgtaatagtgggctc aaacaaaaagttttggattattacaaaagagagattctccagacatacggctatgagcac atattgaccttacacaacctggagaaggccggcctgctgaaaccgcagacggggggcaga aacaattacccaactatacggaaaacattacgcctctggatggatgatgttaatgagcaa aaccccacggacatatcgtatgtgtacagtgggtatgccccgctcagtgtgcggctggcc cagctgctttcccggcctggctggcggagcatcgaggaggtcctccgcatcctcccaggg ccccactttgaggagcggcagccactgcccacaggactgcagaagaaacgtcaaccggga gaaaaccgagtgactctgatatttttccttgggggcgtaaccttcgctgaaattgctgcc ctgcgatttctctcccagttggaagatggaggtacagaatatgtcattgccaccactaaa ctaatgaatggaaccagttggatagaggctctgatggaaaaacctttctag

Homo sapiens (human): 23339 Help Entry 23339             CDS       T01001                                  Symbol VPS39, TLP, VAM6, hVam6p Name (RefSeq) VPS39 subunit of HOPS complex   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism hsa  Homo sapiens (human) Pathway hsa04140   Autophagy - animal hsa04148   Efferocytosis hsa05132   Salmonella infection Network nt06181  Salmonella nt06532  Autophagy   Element N01300   Tethering of late endosomes and lysosomes N01301   Salmonella SifA to Tethering of late endosomes and lysosomes N01721   Autophagosome and lysosome fusion, tethering factor Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     23339 (VPS39)    04148 Efferocytosis     23339 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     23339 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     23339 (VPS39) Membrane trafficking [BR:hsa04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     23339 (VPS39) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_2 Vps39_1 CNH Clathrin KCTD11_21_C EcoR124_C Motif Other DBs NCBI-GeneID:  23339 NCBI-ProteinID:  NP_001288067 OMIM:  612188 HGNC:  20593 Ensembl:  ENSG00000166887 UniProt:  Q96JC1 Structure PDB LinkDB All DBs Position 15:complement(42158701..42208304) Genome browser AA seq 886 aa AA seqDB search MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVASPESGSCN RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF TCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA LNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASN HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYL TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLA IPYLEHIIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEY RQKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAE EYCHKHYDRNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHS KLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQ QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT NT seq 2661 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctctgcaaatcgactgt ctggctgcctgggaggaatggcttcttgtgggaaccaaacaaggacatcttcttctctat aggattcggaaggacgttgtgccagcagatgtagcatcacctgaaagcggcagttgcaac agatttgaagtgacactagagaaatccaataagaacttctccaaaaagattcagcagatc catgtggtttcccagtttaagattctggtcagcttgttagaaaataacatttatgtccat gacctattgacatttcaacaaatcactacggtttcaaaggcaaagggagcatcactgttt acttgtgacctccagcacacagagaccggtgaggaggtgttacggatgtgtgtggcagta aaaaagaagctgcagctctatttctggaaggacagggaatttcatgaattgcagggggac tttagtgtgccagatgtgcccaagtccatggcgtggtgtgaaaattctatctgtgtgggt ttcaagagagactactacctaataagggtggatggaaaggggtccatcaaagagctcttt ccaacaggaaaacagctggagcccttagttgcacctctggcagatggaaaagtggctgtg ggccaggatgatctcaccgtggtactcaatgaggaagggatctgcacacagaaatgtgcc ctgaactggacggacataccagtggccatggagcaccagcctccctacatcattgcagtg ttgcctcgatatgttgagatccgaacatttgaaccgaggcttctggtccaaagcattgaa ttgcaaaggccccgtttcattacctcaggaggatcaaacattatctatgtggccagcaat cattttgtttggagactcatccctgtccccatggcaacccaaatccaacaacttctccag gacaagcagtttgaattggctctgcagctcgcagaaatgaaagatgattctgacagtgaa aagcagcaacaaattcatcacatcaagaacttgtatgccttcaacctcttctgccagaag cgttttgatgagtccatgcaggtctttgctaaacttggcacagatcccacccatgtgatg ggcctgtaccctgacctgctgcccacagactacagaaagcagttgcagtatcccaaccca ttgcctgtgctctccggggctgaattggagaaggctcacttagctctgattgactacctg acacagaaacgaagtcaattggtaaagaagctgaatgactctgatcaccagtcaagcacc tcaccgctcatggaaggcactcccaccatcaaatccaagaagaagctgctacaaatcatc gacaccaccctgctcaagtgctatctccatacaaatgtggccctggtggcccccttgcta cgcctggagaacaatcactgccacatcgaggagagcgagcacgtgctaaagaaggctcac aagtacagtgagcttatcatcctgtatgagaagaaggggctccacgagaaagctctgcag gtgctcgtggaccagtccaagaaagccaactcccctctgaaaggccacgagaggacagtg cagtatctgcagcatctgggcacagaaaacctgcatttgattttctcctactcagtgtgg gtgctgagagacttcccagaagatggcctgaagatatttactgaagatctcccggaagtg gagtctctgccacgtgatcgagtcctcggcttcttaatagagaattttaagggtctggct attccttatctggaacacatcatccatgtttgggaggagacaggctctcggttccacaac tgcctgatccagctatactgtgagaaggtgcaaggtctgatgaaggagtatctcctgtcc ttccctgcaggcaaaaccccagtcccagctggagaggaagagggtgagctgggagaatac cggcaaaagctcctcatgttcttggagatttccagctactatgatccaggccggctcatc tgtgattttccctttgatggcctcttagaagaacgagctctcctgttggggcgcatgggg aaacatgaacaagctcttttcatttatgtccacatcttgaaggatacaaggatggctgag gagtactgccacaaacactatgaccgaaacaaagatggcaacaaagatgtgtatctgtcc ctgcttcggatgtacctgtcgccccccagcattcactgcctggggccaatcaagctggaa ctactggagccaaaagccaacctccaggccgctctgcaggtcctcgagctacaccacagc aaactggacaccaccaaggccctcaaccttctgccagcaaacactcagatcaatgacata cgcatcttcctggaaaaggtcttggaagaaaatgcacaaaagaaacggttcaatcaagtg ctcaagaaccttctccatgcagaattcctgagggtccaggaagagcggattttacaccag caggtgaagtgcatcatcacagaggagaaggtgtgcatggtgtgtaagaagaagattggg aacagtgcatttgcaagataccccaatggagtggtcgtccattacttctgttccaaagag gtaaacccagctgacacttga

Homo sapiens (human): 27072 Help Entry 27072             CDS       T01001                                  Symbol VPS41, HVPS41, HVSP41, SCAR29, hVps41p Name (RefSeq) VPS41 subunit of HOPS complex   KO K20184   vacuolar protein sorting-associated protein 41 Organism hsa  Homo sapiens (human) Pathway hsa04140   Autophagy - animal hsa04148   Efferocytosis hsa05132   Salmonella infection Network nt06181  Salmonella nt06532  Autophagy   Element N01300   Tethering of late endosomes and lysosomes N01301   Salmonella SifA to Tethering of late endosomes and lysosomes N01721   Autophagosome and lysosome fusion, tethering factor Disease H01891   Autosomal recessive spinocerebellar ataxias Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     27072 (VPS41)    04148 Efferocytosis     27072 (VPS41)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     27072 (VPS41)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     27072 (VPS41) Membrane trafficking [BR:hsa04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     27072 (VPS41) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin ANAPC4_WD40 Vps39_2 Vps39_1 zf-RING_5 Frtz RIG-I_C zf-RING_2 zf-rbx1 Motif Other DBs NCBI-GeneID:  27072 NCBI-ProteinID:  NP_055211 OMIM:  605485 HGNC:  12713 Ensembl:  ENSG00000006715 UniProt:  P49754 LinkDB All DBs Position 7:complement(38722974..38909191) Genome browser AA seq 854 aa AA seqDB search MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWR GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKV CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCA RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQK ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI REWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM KGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSA KNRGPGSAILEMKK NT seq 2565 nt NT seq  +upstreamnt  +downstreamnt atggcggaagcagaggagcaggaaactgggtcccttgaagaatctacagatgagtctgag gaagaagagagcgaagaggaacccaagctgaagtatgaaaggctttccaatggggtaact gaaatacttcagaaggatgcagctagctgcatgacagtccatgacaagtttttggcattg ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt gatgtaagtcctgtgaagataaatcagattagcttggatgaaagtggagagcacatgggt gtgtgttcagaggatggcaaggtgcaggtatttggactgtattctggagaagaatttcac gagacttttgactgtcccattaaaattattgctgtgcacccacatttcgtgagatccagt tgcaagcagtttgtgaccggagggaagaagctgctactgtttgaacggtcttggatgaac agatggaagtctgctgttctgcatgaaggggaagggaacataaggagtgtgaagtggaga ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacatcatctcaaag caaagaatcaccaatgtgccccgggatgatataagtcttcgcccagacatgtatccctgc agcctctgctggaaggacaatgtgacactgattattggctgggggacttctgtcaaggtg tgctcagtgaaggaacggcatgccagtgaaatgagggatttgccaagtcgatatgttgaa atagtgtctcagtttgaaactgaattctacatcagtggacttgcacctctctgtgatcag cttgttgtactttcgtatgtaaaggagatttcagaaaaaacggaaagagaatactgtgcc aggcctagactggacatcatccagccactttctgagacttgtgaagagatctcttctgat gctttgacagtcagaggctttcaggagaatgaatgtagagattatcatttagaatactct gaaggggaatcacttttttacatcgtgagtccgagagatgttgtagtggccaaggaacga gaccaagatgatcacattgactggctccttgaaaagaagaaatatgaagaagcattgatg gcagctgaaattagccaaaaaaatattaaaagacataagattctggatattggcttggca tatataaatcacctggtggagagaggagactatgacatagcagcacgcaaatgccagaaa attcttgggaaaaatgcagcactctgggaatatgaagtttataaatttaaagaaattgga cagcttaaggctattagtccttatttgccaagaggtgatccagttctgaaaccactcatc tatgaaatgatcttacatgaatttttggagagtgattatgagggttttgccacattgatc cgagaatggcctggagatctgtataataattcagtcatagttcaagcagttcgggatcat ttgaagaaagatagtcagaacaagactttacttaaaaccctggcagaattgtacacctat gacaagaactatggcaatgctctggaaatatacttaacattaagacataaagacgttttt cagttgatccacaagcataatcttttcagttctatcaaggataaaattgttttattaatg gattttgattcagagaaagctgttgacatgcttttggacaatgaagataaaatttcaatt aaaaaggtagtggaagaattggaagacagaccagagctacagcatgtgtatttgcataag cttttcaagagagaccaccataaggggcagcgttaccatgaaaaacagatcagtctttat gctgaatatgatcgaccaaacttacttccctttctccgagacagtacccattgcccactt gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttctg agccgaatgggtaatagccgaagtgccctgaagatgattatggaggaattacatgatgtt gataaagcaatcgaatttgccaaggagcaagatgatggagagctgtgggaagatttgatt ttatattccattgacaaaccaccatttattactggcttgttaaacaacattggcacacat gttgacccaattctactgattcaccgtattaaggaaggaatggagatccccaatttgaga gattccttggttaaaattctgcaagactacaatttgcaaattctgcttcgtgaaggctgc aagaagattctcgtagctgactctttgtccttactgaagaaaatgcaccgaactcaaatg aaaggtgttcttgttgatgaggagaacatctgtgagtcgtgcctttcccctattcttcca tcagatgcagctaagcccttcagcgtggtggtcttccattgccggcacatgttccacaag gagtgcctgcccatgcccagcatgaactctgctgcacagttctgcaacatctgcagtgct aagaaccgtggaccaggaagtgcaattttggagatgaaaaaatag

Homo sapiens (human): 9895 Help Entry 9895              CDS       T01001                                  Symbol TECPR2, HSAN9, KIAA0329, SPG49 Name (RefSeq) tectonin beta-propeller repeat containing 2   KO K23881   tectonin beta-propeller repeat-containing protein 2 Organism hsa  Homo sapiens (human) Network nt06532  Autophagy   Element N01721   Autophagosome and lysosome fusion, tethering factor Disease H00265   Hereditary sensory and autonomic neuropathy H00266   Hereditary spastic paraplegia Brite KEGG Orthology (KO) [BR:hsa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     9895 (TECPR2) Membrane trafficking [BR:hsa04131]  Autophagy   Other autophagy associated proteins    Others     9895 (TECPR2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hyd_WA Tectonin WD40 ANAPC4_WD40 WD40_like Motif Other DBs NCBI-GeneID:  9895 NCBI-ProteinID:  NP_055659 OMIM:  615000 HGNC:  19957 Ensembl:  ENSG00000196663 UniProt:  O15040 LinkDB All DBs Position 14:102362941..102502477 Genome browser AA seq 1411 aa AA seqDB search MASISEPVTFREFCPLYYLLNAIPTKIQKGFRSIVVYLTALDTNGDYIAVGSSIGMLYLY CRHLNQMRKYNFEGKTESITVVKLLSCFDDLVAAGTASGRVAVFQLVSSLPGRNKQLRRF DVTGIHKNSITALAWSPNGMKLFSGDDKGKIVYSSLDLDQGLCNSQLVLEEPSSIVQLDY SQKVLLVSTLQRSLLFYTEEKSVRQIGTQPRKSTGKFGACFIPGLCKQSDLTLYASRPGL RLWKADVHGTVQATFILKDAFAGGVKPFELHPRLESPNSGSCSLPERHLGLVSCFFQEGW VLSWNEYSIYLLDTVNQATVAGLEGSGDIVSVSCTENEIFFLKGDRNIIRISSRPEGLTS TVRDGLEMSGCSERVHVQQAEKLPGATVSETRLRGSSMASSVASEPRSRSSSLNSTDSGS GLLPPGLQATPELGKGSQPLSQRFNAISSEDFDQELVVKPIKVKRKKKKKKTEGGSRSTC HSSLESTPCSEFPGDSPQSLNTDLLSMTSSVLGSSVDQLSAESPDQESSFNGEVNGVPQE NTDPETFNVLEVSGSMPDSLAEEDDIRTEMPHCHHAHGRELLNGAREDVGGSDVTGLGDE PCPADDGPNSTQLPFQEQDSSPGAHDGEDIQPIGPQSTFCEVPLLNSLTVPSSLSWAPSA EQWLPGTRADEGSPVEPSQEQDILTSMEASGHLSTNLWHAVTDDDTGQKEIPISERVLGS VGGQLTPVSALAASTHKPWLEQPPRDQTLTSSDEEDIYAHGLPSSSSETSVTELGPSCSQ QDLSRLGAEDAGLLKPDQFAESWMGYSGPGYGILSLVVSEKYIWCLDYKGGLFCSALPGA GLRWQKFEDAVQQVAVSPSGALLWKIEQKSNRAFACGKVTIKGKRHWYEALPQAVFVALS DDTAWIIRTSGDLYLQTGLSVDRPCARAVKVDCPYPLSQITARNNVVWALTEQRALLYRE GVSSFCPEGEQWKCDIVSERQALEPVCITLGDQQTLWALDIHGNLWFRTGIISKKPQGDD DHWWQVSITDYVVFDQCSLFQTIIHATHSVATAAQAPVEKVADKLRMAFWSQQLQCQPSL LGVNNSGVWISSGKNEFHVAKGSLIGTYWNHVVPRGTASATKWAFVLASAAPTKEGSFLW LCQSSKDLCSVSAQSAQSRPSTVQLPPEAEMRAYAACQDALWALDSLGQVFIRTLSKSCP TGMHWTRLDLSQLGAVKLTSLACGNQHIWACDSRGGVYFRVGTQPLNPSLMLPAWIMIEP PVQPAGVSLVSVHSSPNDQMLWVLDSRWNVHVRTGITEEMPVGTAWEHVPGLQACQLALS TRTVWARCPNGDLARRYGVTDKNPAGDYWKKIPGSVSCFTVTASDELWAVGPPGYLLQRL TKTFSHSHGTQKSSQAAMPHPEDLEDEWEVI NT seq 4236 nt NT seq  +upstreamnt  +downstreamnt atggcatcgatatcagagcctgttacattcagagagttctgcccgttgtactatctcctc aatgccattccgacaaagatccagaagggtttccgctctatcgtggtctatctcacggcc ctcgacaccaacggggactacatcgcggtgggcagcagcatcggcatgctctatctgtac tgccggcacctcaaccagatgaggaagtacaactttgaggggaagacggaatctatcact gtggtgaagctgctgagctgctttgatgacctggtggcagcaggcacagcctctggcagg gttgcagtttttcaacttgtatcttcattgccagggagaaataaacagcttcggagattt gatgtcactggtattcacaaaaatagcattacagctctggcttggagccccaatggaatg aaattgttctctggagatgacaaaggcaaaattgtttattcttctctggatctagaccag gggctctgtaactcccagctggtgttggaggagccatcttccattgtgcagctggattat agccagaaagtgctgctggtctctactctgcaaagaagtctgctcttttacactgaagaa aagtctgtaaggcaaattggaacacaaccaaggaaaagtactgggaaatttggtgcttgt tttataccaggactctgtaagcaaagtgatctaaccttgtatgcgtcacggcccgggctc cggctatggaaggctgatgtccacgggactgttcaagccacgtttatcttaaaagatgct tttgccgggggagtcaagccttttgaactgcacccgcgtctggaatcccccaacagtgga agttgcagcttacctgagaggcacctggggcttgtttcatgtttctttcaagaaggctgg gtgctgagttggaatgaatatagtatctatctcctagacacagtcaaccaggccacagtt gctggtttggaaggatccggtgatattgtgtctgtttcgtgcacagaaaatgaaatattt ttcttgaaaggagataggaacattataagaatttcaagcaggcctgaaggattaacatca acagtgagagatggtctggagatgtctggatgctcagagcgtgtccacgtgcagcaagcg gagaagctgccaggggccacagtttctgagacgaggctcagaggctcttccatggccagc tccgtggccagcgagccaaggagcaggagcagctcgctcaactccaccgacagcggctcc gggctcctgccccctgggctccaggccacccctgagctgggcaagggcagccagcccctg tcacagagattcaacgccatcagctcagaggactttgaccaggagcttgtcgtgaagcct atcaaagtgaaaaggaagaagaagaagaagaagacagaaggtggaagcaggagcacctgt cacagctccctggaatcgacaccctgctccgaatttcctggggacagtccccagtccttg aacacagacttgctgtcgatgacctcaagtgtcctgggcagtagcgtggatcagttaagt gcagagtctccagaccaggaaagcagcttcaatggtgaagtgaacggtgtcccacaggaa aatactgaccccgaaacgtttaatgtcctggaggtgtcaggatcaatgcctgattctctg gctgaggaagatgacattagaactgaaatgccacactgtcaccatgcacatgggcgggag ctgctcaatggagcgagggaagatgtgggaggcagtgatgtcacgggactcggagatgag ccgtgtcctgcagatgatggaccaaatagcacacagttacccttccaagaacaggacagc tctcctggggcgcatgatggggaagacatccaacccattggcccccaaagcactttttgt gaagtccccctcctgaactcactcactgtgccttccagcctcagctgggccccaagtgct gaacagtggctgcctgggaccagagctgatgaaggcagccccgtggagcccagccaagag caggacatcctaaccagcatggaggcctctggccacctcagcacaaatctctggcatgct gtcactgatgatgacacaggtcagaaagaaatacccatttctgaacgtgtcttggggagt gtgggaggacagctgactccggtctctgccttggcagccagcactcacaagccctggctt gagcagcctccacgggatcagacattgacgtccagcgatgaggaggacatctatgcccac gggcttccttcttcatcctcagagacgagtgtgacagagctcggacctagttgctcccag caggacctgagccggctgggtgcagaggacgccgggctgctcaagccagatcagtttgca gaaagctggatgggctactcgggtcccggctatggcatcctcagcttggtggtctccgag aagtatatctggtgcctggactacaaaggcggcctgttctgcagcgcgttgccgggcgcc gggctgcgctggcagaagtttgaagatgctgtccagcaggtggcagtctcgccctcagga gcccttctctggaagattgaacagaaatctaaccgggcttttgcttgtgggaaagtcacc atcaaggggaagcggcactggtacgaagccctgccccaggcagtgtttgtggccctgagc gatgacacggcctggatcatcaggaccagtggggacctatacttgcagacaggtctgagc gtggatcgcccttgtgccagagccgtaaaggtggactgtccctacccgctgtcccagatc acagcccggaacaatgtggtgtgggcgctgacagagcagagggccctcctgtaccgggag ggcgtgagcagcttctgtccggaaggcgagcagtggaagtgtgacattgtcagcgaaagg caagctttagaacccgtctgcataacgctcggggatcagcagactctctgggccctggac atccatgggaacctgtggttcagaactggcattatttccaagaagccccaaggagatgac gaccattggtggcaagtgagcatcacggactatgtggtgtttgaccagtgcagcttattt cagacgataatccatgccactcactcggtggccacagcagcccaagcccccgtagaaaag gtggcagataagctgcgcatggcgttttggtcccagcagcttcagtgccagccaagcctt ctcggggtcaataacagcggtgtctggatctcctcgggcaagaatgaattccacgtcgct aagggaagtctcataggcacctactggaatcatgtggttccccgtgggacagcttctgct acaaaatgggcctttgtgttggcttctgcagctcccacgaaggaaggaagcttcctgtgg ctgtgccagagcagcaaggacctgtgcagcgtcagcgcccagagcgcacagtcgcggccc tccacggtgcagctgcctcccgaagccgagatgcgcgcctatgccgcctgccaggatgcg ctgtgggcgctggacagcctcggccaggtgttcatcaggacgctctccaagagctgcccc acgggcatgcactggaccaggctggacctctcccagctaggagctgtaaaattgacaagc ttggcatgtggaaatcagcacatctgggcctgtgattccaggggtggagtttacttccgt gtagggactcagcctctcaatcccagtctcatgcttccagcctggataatgattgagcca cctgtccagcccgccggggtcagcttggtcagcgtccattccagccccaacgaccagatg ctgtgggtgcttgacagcaggtggaacgtgcacgtgcggaccgggatcaccgaggagatg cctgtggggaccgcctgggagcatgtgccagggttgcaggcctgccagctggcgctgagc accaggaccgtgtgggcccgctgtccaaacggagacctcgcccggcggtacggcgtcaca gacaagaaccccgccggggactactggaagaaaattcccggcagcgtgtcgtgtttcaca gtgactgcgtcagatgagctgtgggctgtgggcccgcccggctacctcctccaacggctg acaaagacgttcagccactcgcacggcacccagaagagcagccaggccgccatgccccac cctgaggacctggaggacgagtgggaggtcatctga

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